RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 NEUROG1Q92886 237 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 NRN1Q9NPD7 142 aa9.01□□□□□ -0.97
LINC00661-204ENST00000549354 TRGV8A0A0C4DH27 118 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 SHISA9B4DS77 424 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 CGB3P0DN86 165 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 CGB7P0DN87 165 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 SFTPCP11686 197 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 HINT1P49773 126 aaPredicted RBP9□□□□□ -0.97
LINC00661-204ENST00000549354 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
LINC00661-204ENST00000549354 Q6ZN92 141 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 C11orf42Q8N5U0 333 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 PPP1R35Q8TAP8 253 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 NABP2Q9BQ15 211 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 MIEN1Q9BRT3 115 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 IGKV1OR2-108A0A075B7D4 117 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 DLEU1O43261 78 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 TMEM11P17152 192 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 COX7A1P24310 79 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 BRS3P32247 399 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 RAB31Q13636 194 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 TIGITQ495A1 244 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 HARBI1Q96MB7 349 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 ZNF586Q9NXT0 402 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 LOC102724200A0A096LPH7 203 aaPredicted RBP9□□□□□ -0.97
LINC00661-204ENST00000549354 TRGV10A0A0A0MS01 117 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 C17orf100A8MU93 164 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 SLC25A17O43808 307 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 UBE2L3P68036 154 aaKnown RBP9□□□□□ -0.97
LINC00661-204ENST00000549354 OR10X1Q8NGY0 326 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 NPIPB3Q92617 1050 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 RNASE6Q93091 150 aaKnown RBP9□□□□□ -0.97
LINC00661-204ENST00000549354 COMMD5Q9GZQ3 224 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 IFI27L2Q9H2X8 130 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 WNK1Q9H4A3 2382 aa9□□□□□ -0.97
LINC00661-204ENST00000549354 SNAI2O43623 268 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 YPEL3P61236 119 aaPredicted RBP8.99□□□□□ -0.97
LINC00661-204ENST00000549354 Q56UQ5 140 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 TPSG1Q9NRR2 321 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 V9GYV3 84 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 SIAH2O43255 324 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 CD99P14209 185 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 ZNF138P52744 262 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 OR1B1Q8NGR6 318 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 LINC00574Q9H8X3 128 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 DSCAML1Q8TD84 2053 aa8.99□□□□□ -0.97
LINC00661-204ENST00000549354 TRAV8-1A0A0A6YYK1 113 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 CORTO00230 105 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 F2RL2O00254 374 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 GPX1P07203 203 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 STPG4Q8N801 248 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 FLYWCH2Q96CP2 140 aaKnown RBP8.98□□□□□ -0.97
LINC00661-204ENST00000549354 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
LINC00661-204ENST00000549354 VSTM5A8MXK1 200 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 TNFRSF1AP19438 455 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 MFAP2P55001 183 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 IBA57Q5T440 356 aaKnown RBP8.98□□□□□ -0.97
LINC00661-204ENST00000549354 ZNF788Q6ZQV5 615 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 Q71RC1 249 aaPredicted RBP8.98□□□□□ -0.97
LINC00661-204ENST00000549354 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 RITA1Q96K30 269 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 SAP30LQ9HAJ7 183 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 HIVEP3Q5T1R4 2406 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 TMSB15BA0A087X1C1 80 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 A0A1W2PS18 150 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 ITGB1BP1O14713 200 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 YPEL1O60688 119 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 RAB7AP51149 207 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 FXYD7P58549 80 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 PAFAH1B2P68402 229 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 ADORA2A-AS1P86434 159 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
LINC00661-204ENST00000549354 TCTEX1D1Q8N7M0 179 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 RAB1CQ92928 201 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 GAFA1Q96PS6 74 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 YPEL2Q96QA6 119 aa8.98□□□□□ -0.97
LINC00661-204ENST00000549354 VPS13CQ709C8 3753 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 E7EQL1 145 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 CCL21O00585 134 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 TNFRSF13BO14836 293 aaPredicted RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 MT-CO2P00403 227 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 COMPP49747 757 aaPredicted RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 SLAQ13239 276 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 RUSC1-AS1Q66K80 236 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 OR4S2Q8NH73 311 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 DNAJC4Q9NNZ3 241 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 JPT1Q9UK76 154 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 PRSS46E5RG02 174 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 MPDU1O75352 247 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 LINC00869P0C866 280 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 C3orf79P0CE67 100 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 SAA1P0DJI8 122 aaPredicted RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 USF1P22415 310 aaPredicted RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 LOXL3P58215 753 aa8.97□□□□□ -0.97
LINC00661-204ENST00000549354 HSPE1P61604 102 aaKnown RBP8.97□□□□□ -0.97
LINC00661-204ENST00000549354 RPL8P62917 257 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms