RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 NAA38Q9BRA0 125 aaKnown RBP9.36□□□□□ -0.91
TCOF1-211ENST00000513346 GTSF1LQ9H1H1 148 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 IGHV3-72A0A0B4J1Y9 119 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 M0R3E3 92 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 EFNA2O43921 213 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 LINC01560Q8TB33 94 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 TMEM160Q9NX00 188 aa9.36□□□□□ -0.91
TCOF1-211ENST00000513346 SYS1-DBNDD2H3BUS1 97 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 GLRXP35754 106 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 MRPL16Q9NX20 251 aaKnown RBP9.35□□□□□ -0.91
TCOF1-211ENST00000513346 IGLV3-32A0A0A0MS00 114 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 MC5RP33032 325 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 LEAP2Q969E1 77 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 SELENOKQ9Y6D0 94 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 CKS1BP61024 79 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 C5orf24Q7Z6I8 188 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 LIME1Q9H400 295 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 ANAPC1Q9H1A4 1944 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 IGHV2OR16-5A0A0B4J2B6 119 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 WNT9BO14905 357 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 IGHV3-48P01763 117 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 AREGP15514 252 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 NABP1Q96AH0 204 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
TCOF1-211ENST00000513346 FANCMQ8IYD8 2048 aa9.35□□□□□ -0.91
TCOF1-211ENST00000513346 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 CLPSP04118 112 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 PDLIM4P50479 330 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 MBNL2Q5VZF2 373 aaKnown RBP9.34□□□□□ -0.91
TCOF1-211ENST00000513346 Q6AWC8 147 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 OR13A1Q8NGR1 328 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
TCOF1-211ENST00000513346 USF3Q68DE3 2245 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 A0A0C4DFX4 3053 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 SNCGO76070 127 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 CECR9P0C854 216 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 ATP5J2P56134 94 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 ASCL4Q6XD76 172 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 OR1N2Q8NGR9 330 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 OR9G9P0C7N8 305 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 TMEM42Q69YG0 159 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 ZNF418Q8TF45 676 aaPredicted RBP9.34□□□□□ -0.91
TCOF1-211ENST00000513346 HEATR5AQ86XA9 2040 aa9.34□□□□□ -0.91
TCOF1-211ENST00000513346 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 B9A039 149 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 SPATA31B1PQ5VZV4 182 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 OR52E5Q8NH55 327 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
TCOF1-211ENST00000513346 ZNF407Q9C0G0 2248 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 CCL25O15444 150 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 PSG9Q00887 426 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 FAM57AQ8TBR7 257 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 PPIAL4CA0A0B4J2A2 164 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 ZNF716A6NP11 495 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 PPIAL4GP0DN37 164 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 CACNG7P62955 275 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 ACP7Q6ZNF0 438 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 MRPS18CQ9Y3D5 142 aaKnown RBP9.33□□□□□ -0.92
TCOF1-211ENST00000513346 IGHV2-26A0A0B4J1V2 119 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 ATP5LO75964 103 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 MGST2Q99735 147 aa9.33□□□□□ -0.92
TCOF1-211ENST00000513346 PHF3Q92576 2039 aaKnown RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 SONP18583 2426 aaKnown RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 MOSP00540 346 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 HBDP02042 147 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 COX6CP09669 75 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 ZNF479Q96JC4 524 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 WNK2Q9Y3S1 2297 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 TRBV6-6A0A0A6YYG2 114 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 C15orf61A6NNL5 157 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 H7C2G1 150 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 GUSBP1Q15486 140 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 RNASE8Q8TDE3 154 aaKnown RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 FOXC2Q99958 501 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 CEACAM8P31997 349 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 GNG5P63218 68 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 GAGE13Q4V321 117 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 ANAPC13Q9BS18 74 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 APOBEC3AP31941 199 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 ERVK11-1P61568 191 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 FAM169BQ8N8A8 192 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 C1orf162Q8NEQ5 155 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-211ENST00000513346 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 OR4C13Q8NGP0 309 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
TCOF1-211ENST00000513346 CCDC168Q8NDH2 2452 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 MGPP08493 103 aa9.31□□□□□ -0.92
TCOF1-211ENST00000513346 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms