RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TMEM190Q8WZ59 177 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 C11orf1Q9H5F2 150 aa13.06□□□□□ -0.32
HDAC6-235ENST00000495515 LYRM2Q9NU23 88 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-235ENST00000495515 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 A8MWP6 167 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 DLK1P80370 383 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 ACOT7LQ6ZUV0 252 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 OR11H7Q8NGC8 314 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 Q8WTZ3 238 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 MARC2Q969Z3 335 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 GINS3Q9BRX5 216 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 C20orf24Q9BUV8 137 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 GGACTQ9BVM4 153 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 SLC25A31Q9H0C2 315 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 SIGLEC8Q9NYZ4 499 aa13.05□□□□□ -0.32
HDAC6-235ENST00000495515 FAM24AA6NFZ4 105 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 PMS2P5A8MQ11 134 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 FNDC10F2Z333 226 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 G3V4G9 280 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 WIPF1O43516 503 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 MPC2O95563 127 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 P2RY1P47900 373 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 SULT1A1P50225 295 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-235ENST00000495515 HBG1P69891 147 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 HBG2P69892 147 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 AKR1C1Q04828 323 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 TIGITQ495A1 244 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
HDAC6-235ENST00000495515 DAZ1Q9NQZ3 744 aaKnown RBP13.04□□□□□ -0.32
HDAC6-235ENST00000495515 SMCO3A2RU48 225 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 C2orf70A6NJV1 201 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 K7EMT4 169 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 IGKV1-17P01599 117 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 CSN3P07498 182 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 GIPP09681 153 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-235ENST00000495515 FGL1Q08830 312 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 TMEM252Q8N6L7 170 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 DYNLRB2Q8TF09 96 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC6-235ENST00000495515 NOTCH3Q9UM47 2321 aa13.03□□□□□ -0.32
HDAC6-235ENST00000495515 TMEM213A2RRL7 107 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 CST7O76096 145 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 RD3LP0DJH9 198 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 FOLR2P14207 255 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 S100A11P31949 105 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 RAP2BP61225 183 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 TOMM20LQ6UXN7 152 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 IL34Q6ZMJ4 242 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 TRGV9Q99603 122 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 NPVFQ9HCQ7 196 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 OR5AC2Q9NZP5 309 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.33
HDAC6-235ENST00000495515 PKD1L1Q8TDX9 2849 aa13.02□□□□□ -0.33
HDAC6-235ENST00000495515 H0YIZ8 118 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 CCNKO75909 580 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 TOMM40O96008 361 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 CBLN1P23435 193 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 BMI1P35226 326 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 BAXQ07812 192 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 LILRB2Q8N423 598 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 TMEM217Q8N7C4 229 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 THAP8Q8NA92 274 aa13.01□□□□□ -0.33
HDAC6-235ENST00000495515 WDR89Q96FK6 387 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-235ENST00000495515 TECRQ9NZ01 308 aaKnown RBP13.01□□□□□ -0.33
HDAC6-235ENST00000495515 TRAV14DV4A0A0A6YYC5 116 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 IGSF23A1L1A6 192 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 CFDP00746 253 aaPredicted RBP13□□□□□ -0.33
HDAC6-235ENST00000495515 ATP6V1FQ16864 119 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 KPRPQ5T749 579 aaPredicted RBP13□□□□□ -0.33
HDAC6-235ENST00000495515 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 OR2K2Q8NGT1 345 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 RNF126Q9BV68 326 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 MBD2Q9UBB5 411 aa13□□□□□ -0.33
HDAC6-235ENST00000495515 IGHV3OR16-8A0A075B7F1 116 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 IGLV1-51P01701 117 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 C8orf88P0DMB2 117 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 EGFEM1PQ0D2K5 195 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 ARL16Q0P5N6 197 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 TEPPQ6URK8 271 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 HAPLN4Q86UW8 402 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 NARS2Q96I59 477 aaKnown RBP12.99□□□□□ -0.33
HDAC6-235ENST00000495515 METTL26Q96S19 204 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 UQCC1Q9NVA1 299 aa12.99□□□□□ -0.33
HDAC6-235ENST00000495515 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 ZNF207O43670 478 aaKnown RBP12.98□□□□□ -0.33
HDAC6-235ENST00000495515 PSG1P11464 419 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 LYL1P12980 280 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 NPPCP23582 126 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDAC6-235ENST00000495515 RAB31Q13636 194 aa12.98□□□□□ -0.33
HDAC6-235ENST00000495515 Q6ZNX1 250 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms