RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 FAM24BQ8N5W8 94 aa19.95■□□□□ 0.78
SHOX2-201ENST00000389589 EPG5Q9HCE0 2579 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 IGHV1-69DA0A0B4J2H0 117 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 NDUFB4O95168 129 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 IGHV1-69P01742 117 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 CRYBA1P05813 215 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 RPL23P62829 140 aaKnown RBP19.94■□□□□ 0.78
SHOX2-201ENST00000389589 TTC9CQ8N5M4 171 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 FAM167A-AS1Q96KT0 104 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 YPEL4Q96NS1 127 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 SLC25A2Q9BXI2 301 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 MLXQ9UH92 298 aa19.94■□□□□ 0.78
SHOX2-201ENST00000389589 HLA-DRB1P01911 266 aa19.93■□□□□ 0.78
SHOX2-201ENST00000389589 ASH1LQ9NR48 2969 aaKnown RBP19.93■□□□□ 0.78
SHOX2-201ENST00000389589 K7EIM0 57 aa19.93■□□□□ 0.78
SHOX2-201ENST00000389589 PLP1P60201 277 aa19.93■□□□□ 0.78
SHOX2-201ENST00000389589 RASL11BQ9BPW5 248 aa19.93■□□□□ 0.78
SHOX2-201ENST00000389589 ZNF355PQ9NSJ1 428 aa19.93■□□□□ 0.78
SHOX2-201ENST00000389589 A1L4Q6 167 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 MSMBP08118 114 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 IGLC1P0CG04 106 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 SLC25A16P16260 332 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 ASPHD1Q5U4P2 390 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 OR5AU1Q8NGC0 362 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 NRGNQ92686 78 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 SPG11Q96JI7 2443 aa19.92■□□□□ 0.78
SHOX2-201ENST00000389589 CLDN34H7C241 214 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 NDPQ00604 133 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 FLI1Q01543 452 aaPredicted RBP19.91■□□□□ 0.78
SHOX2-201ENST00000389589 C11orf52Q96A22 123 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 IGHV7-81A0A0B4J1V7 117 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 FABP1P07148 127 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 RAB5AP20339 215 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 LINC00305Q7Z4B0 112 aa19.91■□□□□ 0.78
SHOX2-201ENST00000389589 SCO2A0A1W2PP80 73 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 A0A1W2PRE2 83 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 HYPMO75409 117 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 MORN5Q5VZ52 161 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 STXBP6Q8NFX7 210 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 OR1B1Q8NGR6 318 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 RBM14Q96PK6 669 aaKnown RBP19.9■□□□□ 0.78
SHOX2-201ENST00000389589 IGLV11-55A0A075B6I3 123 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 TRAV5A0A0B4J249 113 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 ORM2P19652 201 aa19.9■□□□□ 0.78
SHOX2-201ENST00000389589 FAM208BQ5VWN6 2430 aa19.89■□□□□ 0.77
SHOX2-201ENST00000389589 B4DSR2 109 aa19.89■□□□□ 0.77
SHOX2-201ENST00000389589 OR10J4P0C629 311 aa19.89■□□□□ 0.77
SHOX2-201ENST00000389589 UBE2L3P68036 154 aaKnown RBP19.89■□□□□ 0.77
SHOX2-201ENST00000389589 CLEC12BQ2HXU8 276 aa19.89■□□□□ 0.77
SHOX2-201ENST00000389589 PAXXQ9BUH6 204 aa19.89■□□□□ 0.77
SHOX2-201ENST00000389589 ELOBQ15370 118 aa19.88■□□□□ 0.77
SHOX2-201ENST00000389589 FANCD2OSQ96PS1 177 aa19.88■□□□□ 0.77
SHOX2-201ENST00000389589 OR51M1Q9H341 326 aa19.88■□□□□ 0.77
SHOX2-201ENST00000389589 THYN1Q9P016 225 aa19.88■□□□□ 0.77
SHOX2-201ENST00000389589 TRAV40A0A0B4J280 105 aa19.88■□□□□ 0.77
SHOX2-201ENST00000389589 DERL1Q9BUN8 251 aa19.88■□□□□ 0.77
SHOX2-201ENST00000389589 GSX1Q9H4S2 264 aaPredicted RBP19.88■□□□□ 0.77
SHOX2-201ENST00000389589 EGR2P11161 476 aaPredicted RBP19.87■□□□□ 0.77
SHOX2-201ENST00000389589 ANAPC16Q96DE5 110 aa19.87■□□□□ 0.77
SHOX2-201ENST00000389589 ZNF48Q96MX3 618 aaPredicted RBP19.87■□□□□ 0.77
SHOX2-201ENST00000389589 ABCA1O95477 2261 aa19.87■□□□□ 0.77
SHOX2-201ENST00000389589 UTP20O75691 2785 aaKnown RBP19.87■□□□□ 0.77
SHOX2-201ENST00000389589 TRAV30A0A087WSZ9 112 aa19.87■□□□□ 0.77
SHOX2-201ENST00000389589 PSG1P11464 419 aa19.87■□□□□ 0.77
SHOX2-201ENST00000389589 TIGITQ495A1 244 aa19.87■□□□□ 0.77
SHOX2-201ENST00000389589 MEGF9Q9H1U4 602 aa19.87■□□□□ 0.77
SHOX2-201ENST00000389589 LRRK2Q5S007 2527 aa19.86■□□□□ 0.77
SHOX2-201ENST00000389589 C1orf196B1AJZ1 125 aa19.86■□□□□ 0.77
SHOX2-201ENST00000389589 GATA3P23771 443 aa19.86■□□□□ 0.77
SHOX2-201ENST00000389589 KLF17Q5JT82 389 aaPredicted RBP19.86■□□□□ 0.77
SHOX2-201ENST00000389589 LINC01551Q86U37 167 aa19.86■□□□□ 0.77
SHOX2-201ENST00000389589 C7orf69Q9H7B7 122 aa19.86■□□□□ 0.77
SHOX2-201ENST00000389589 IGKV1-17P01599 117 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 RAB5BP61020 215 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 SGMS2Q8NHU3 365 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 Q8WTZ3 238 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 IGHV3OR16-10A0A075B7F0 116 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 TRAV20A0A0B4J274 112 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 RD3LP0DJH9 198 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 MFAP4P55083 255 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 ZNF343Q6P1L6 599 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 C16orf82Q7Z2V1 217 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 HIGD1AQ9Y241 93 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 URGCP-MRPS24S4R325 110 aa19.85■□□□□ 0.77
SHOX2-201ENST00000389589 HSPB9Q9BQS6 159 aa19.84■□□□□ 0.77
SHOX2-201ENST00000389589 PYYP10082 97 aa19.83■□□□□ 0.77
SHOX2-201ENST00000389589 CD99P14209 185 aa19.83■□□□□ 0.77
SHOX2-201ENST00000389589 HIST1H1BP16401 226 aaKnown RBP19.83■□□□□ 0.77
SHOX2-201ENST00000389589 BRD3OSQ6XYD6 125 aa19.83■□□□□ 0.77
SHOX2-201ENST00000389589 FXYD5Q96DB9 178 aa19.83■□□□□ 0.77
SHOX2-201ENST00000389589 GGTLC3B5MD39 225 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 C9JCJ5 164 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 H7BYZ3 331 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 OR5T1Q8NG75 326 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 FAM110DQ8TAY7 271 aaPredicted RBP19.83■□□□□ 0.76
SHOX2-201ENST00000389589 TMEM68Q96MH6 324 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 HIF1ANQ9NWT6 349 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 LY96Q9Y6Y9 160 aa19.83■□□□□ 0.76
SHOX2-201ENST00000389589 LYZP61626 148 aa19.82■□□□□ 0.76
SHOX2-201ENST00000389589 SUMO1P63165 101 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms