RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 C19orf35Q6ZS72 473 aa17.69■□□□□ 0.42
TPM4-201ENST00000300933 SLC35B1P78383 322 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 TMEM30BQ3MIR4 351 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 ZNF841Q6ZN19 808 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 OR9G1Q8NH87 305 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 OSR1Q8TAX0 266 aaPredicted RBP17.68■□□□□ 0.42
TPM4-201ENST00000300933 TMEM133Q9H2Q1 129 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 BET1LQ9NYM9 111 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 IL36BQ9NZH7 164 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 ZFP30Q9Y2G7 519 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 YTHDF2Q9Y5A9 579 aaKnown RBP17.68■□□□□ 0.42
TPM4-201ENST00000300933 TRAV34A0A0B4J273 112 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 FBXL19-AS1Q494R0 122 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 OR4C13Q8NGP0 309 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 OR2T6Q8NHC8 308 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 SLC35E1Q96K37 410 aa17.68■□□□□ 0.42
TPM4-201ENST00000300933 ZNF430Q9H8G1 570 aaPredicted RBP17.68■□□□□ 0.42
TPM4-201ENST00000300933 SPATA45Q537H7 98 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 STPG4Q8N801 248 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 GNB4Q9HAV0 340 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 TBL2Q9Y4P3 447 aaKnown RBP17.67■□□□□ 0.42
TPM4-201ENST00000300933 MPDU1O75352 247 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 PMCHP20382 165 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 TMEM186Q96B77 213 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 ZNF257Q9Y2Q1 563 aa17.67■□□□□ 0.42
TPM4-201ENST00000300933 CGB1A6NKQ9 187 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 RNASE2P10153 161 aaKnown RBP17.66■□□□□ 0.42
TPM4-201ENST00000300933 LGALS4P56470 323 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 OR8I2Q8N0Y5 310 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 CFAP46Q8IYW2 2715 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 ESDP10768 282 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 SUMO1P63165 101 aaKnown RBP17.66■□□□□ 0.42
TPM4-201ENST00000300933 WT1-ASQ06250 92 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 TMEM177Q53S58 311 aa17.66■□□□□ 0.42
TPM4-201ENST00000300933 IGHV2-26A0A0B4J1V2 119 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 IGLV2-23P01705 113 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 SSBP2P81877 361 aaPredicted RBP17.65■□□□□ 0.42
TPM4-201ENST00000300933 Q6ZVH6 145 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 NDUFA4L2Q9NRX3 87 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 PPIAL4CA0A0B4J2A2 164 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 GPX1P07203 203 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 PPIAL4GP0DN37 164 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 AMTP48728 403 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 PPOXP50336 477 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 RAB1CQ92928 201 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 TXN2Q99757 166 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 ZNF586Q9NXT0 402 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 WASHC3Q9Y3C0 194 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 ZFHX3Q15911 3703 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 MMD2Q8IY49 270 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 Q8N976 141 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 OR4P4Q8NGL7 312 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 OR5B3Q8NH48 314 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 RCHY1Q96PM5 261 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 WNT10AQ9GZT5 417 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 ONECUT1Q9UBC0 465 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 NAT8BQ9UHF3 227 aa17.65■□□□□ 0.42
TPM4-201ENST00000300933 CELSR1Q9NYQ6 3014 aa17.64■□□□□ 0.42
TPM4-201ENST00000300933 A0A1W2PPR1 153 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 A0A1W2PRD5 423 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 A0A1W2PRF3 423 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 A0A1W2PRM7 423 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 Q6ZN92 141 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 MIR17HGQ75NE6 70 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 OR4B1Q8NGF8 309 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 NRN1Q9NPD7 142 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 STAG3L2P0CL84 134 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 STAG3L3P0CL85 134 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 RPEL1Q2QD12 228 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 ATOH7Q8N100 152 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 OR1L8Q8NGR8 309 aa17.64■□□□□ 0.41
TPM4-201ENST00000300933 NDUFS7O75251 213 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 CXorf1O96002 111 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 LINC00869P0C866 280 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 HCP5Q6MZN7 132 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 CACNA1BQ00975 2339 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 IGHV3-21A0A0B4J1V1 117 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 NDUFB8O95169 186 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 OR5G3P0C626 314 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 UQCRFS1P47985 274 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 TCL1AP56279 114 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 RUSC1-AS1Q66K80 236 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 PDPNQ86YL7 162 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 LINC00311Q8N616 119 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 RNF2Q99496 336 aa17.63■□□□□ 0.41
TPM4-201ENST00000300933 ARF6P62330 175 aa17.62■□□□□ 0.41
TPM4-201ENST00000300933 C22orf46C9J442 243 aa17.62■□□□□ 0.41
TPM4-201ENST00000300933 Q0VG73 95 aa17.62■□□□□ 0.41
TPM4-201ENST00000300933 RAB31Q13636 194 aa17.62■□□□□ 0.41
TPM4-201ENST00000300933 C20orf202A1L168 122 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 USF1P22415 310 aaPredicted RBP17.61■□□□□ 0.41
TPM4-201ENST00000300933 CD24P25063 80 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 FXYD3Q14802 87 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 LHFPL4Q7Z7J7 247 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 FAM19A2Q8N3H0 131 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 PNKDQ8N490 385 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 UHRF2Q96PU4 802 aa17.61■□□□□ 0.41
TPM4-201ENST00000300933 FNDC4Q9H6D8 234 aaPredicted RBP17.61■□□□□ 0.41
TPM4-201ENST00000300933 MRPL36Q9P0J6 103 aaKnown RBP17.61■□□□□ 0.41
TPM4-201ENST00000300933 SPG11Q96JI7 2443 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms