RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 FIS1Q9Y3D6 152 aa3.38□□□□□ -1.87
CD44-202ENST00000278385 FAM215AQ9Y5M1 114 aa3.38□□□□□ -1.87
CD44-202ENST00000278385 DNAJC15Q9Y5T4 150 aa3.38□□□□□ -1.87
CD44-202ENST00000278385 MDC1Q14676 2089 aaKnown RBP3.38□□□□□ -1.87
CD44-202ENST00000278385 CFAP46Q8IYW2 2715 aa3.38□□□□□ -1.87
CD44-202ENST00000278385 SCN3AQ9NY46 2000 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 DOCK10Q96BY6 2186 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 NBPF19A0A087WUL8 3843 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 A0A087WUU8 490 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 IGLV3-32A0A0A0MS00 114 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 TRAV8-1A0A0A6YYK1 113 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 CIB4A0PJX0 185 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 OR4C45A6NMZ5 311 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 LINC00032P0C843 101 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 COX7A1P24310 79 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 NPY1RP25929 384 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 RAP1AP62834 184 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 PSG9Q00887 426 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 GUCA2BQ16661 112 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 ABCA11PQ4W5N1 156 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 NXNL2Q5VZ03 156 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 FAM53AQ6NSI3 398 aaPredicted RBP3.37□□□□□ -1.87
CD44-202ENST00000278385 ARL9Q6T311 187 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 TMEM75Q8N9X5 138 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 NPRL2Q8WTW4 380 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 TWIST2Q8WVJ9 160 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 DCUN1D4Q92564 292 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 FRZBQ92765 325 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 ZNF524Q96C55 264 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 MED11Q9P086 117 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 ANAPC10Q9UM13 185 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 NBASA2RRP1 2371 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 NUP210LQ5VU65 1888 aa3.37□□□□□ -1.87
CD44-202ENST00000278385 DOPEY2Q9Y3R5 2298 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 FLNBO75369 2602 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 GCN1Q92616 2671 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 PEX7O00628 323 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 FABP3P05413 133 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 RPS4Y1P22090 263 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 ZNF136P52737 540 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 DIO3P55073 304 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 HERVK_113P61574 105 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 RPL23P62829 140 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 GRB2P62993 217 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 RPL38P63173 70 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 SELENOWP63302 87 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 RHEBQ15382 184 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 TAF9Q16594 264 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 ZNF239Q16600 458 aaKnown RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 UBE2NLQ5JXB2 153 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 DNLZQ5SXM8 178 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 MARCH3Q86UD3 253 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 C12orf45Q8N5I9 185 aaPredicted RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 DRAM1Q8N682 238 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 ZNF433Q8N7K0 673 aaPredicted RBP3.36□□□□□ -1.87
CD44-202ENST00000278385 OR2M3Q8NG83 312 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 ZNF696Q9H7X3 374 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 SLC25A22Q9H936 323 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 RPS6KB2Q9UBS0 482 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 ERG28Q9UKR5 140 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 CPAMD8Q8IZJ3 1885 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 CNTRLQ7Z7A1 2325 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 SCN2AQ99250 2005 aa3.36□□□□□ -1.87
CD44-202ENST00000278385 UBR5O95071 2799 aaPredicted RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 ASH1LQ9NR48 2969 aaKnown RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 ICE1Q9Y2F5 2266 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 BOD1L1Q8NFC6 3051 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 TMED7-TICAM2A0A0A6YYA0 188 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 TRAV4A0A0B4J268 109 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 LOC102725191A0A1B0GVB3 256 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 A0A1W2PQD3 144 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 RIIAD1A6NNX1 92 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 H3BSA7 217 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 M0R1X1 148 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 COX7A2P2O60397 106 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 SRSF10O75494 262 aaKnown RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 DUSP14O95147 198 aaKnown RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 BGLAPP02818 100 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 HMGN2P05204 90 aaKnown RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 SOD3P08294 240 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 PSG2P11465 335 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 EVI2AP22794 236 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 IL3RAP26951 378 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 OR10J1P30954 320 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 ATP5G3P48201 142 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 EVX1P49640 407 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 PSMB3P49720 205 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 KRTAP10-9P60411 292 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 LOXL1Q08397 574 aaPredicted RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 FABP9Q0Z7S8 132 aa3.35□□□□□ -1.87
CD44-202ENST00000278385 ENDOGQ14249 297 aaKnown RBP3.35□□□□□ -1.87
CD44-202ENST00000278385 NEDD8Q15843 81 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms