RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SPSB3Q6PJ21 355 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 SGPP2Q8IWX5 399 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 TOMM5Q8N4H5 51 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 SLC35G3Q8N808 338 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 IL22RA2Q969J5 263 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 GPR146Q96CH1 333 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 SDHCQ99643 169 aaPredicted RBP8.44□□□□□ -1.06
SMAD4-211ENST00000590499 ASCL2Q99929 193 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 MLXQ9UH92 298 aa8.44□□□□□ -1.06
SMAD4-211ENST00000590499 MT-CO2P00403 227 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 IFNA17P01571 189 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 CTSGP08311 255 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 RNASE2P10153 161 aaKnown RBP8.43□□□□□ -1.06
SMAD4-211ENST00000590499 SPCS3P61009 180 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 TM4SF20Q53R12 229 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 SBSPONQ8IVN8 264 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM61Q8N0U2 210 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 OR52E5Q8NH55 327 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 RNASE11Q8TAA1 199 aaKnown RBP8.43□□□□□ -1.06
SMAD4-211ENST00000590499 DYNLRB2Q8TF09 96 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 TXN2Q99757 166 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 PALMDQ9NP74 551 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
SMAD4-211ENST00000590499 CACNG5Q9UF02 275 aa8.43□□□□□ -1.06
SMAD4-211ENST00000590499 NDUFA4O00483 81 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 AKR1C4P17516 323 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 HOXA1P49639 335 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-211ENST00000590499 MFAP4P55083 255 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 BAK1Q16611 211 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 Q56UQ5 140 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 NMSQ5H8A3 153 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 UBAC2Q8NBM4 344 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 MARC2Q969Z3 335 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
SMAD4-211ENST00000590499 PDCD10Q9BUL8 212 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 GAR1Q9NY12 217 aaKnown RBP8.42□□□□□ -1.06
SMAD4-211ENST00000590499 NDUFA13Q9P0J0 144 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 MRPL27Q9P0M9 148 aaKnown RBP8.42□□□□□ -1.06
SMAD4-211ENST00000590499 KCNIP3Q9Y2W7 256 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 UFC1Q9Y3C8 167 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 U3KQK5 164 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 STARD9Q9P2P6 4700 aa8.42□□□□□ -1.06
SMAD4-211ENST00000590499 A0A0B4J2A0 478 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 IGHV3-48P01763 117 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 SNCAP37840 140 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 SRPXP78539 464 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 ZNF57Q68EA5 555 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-211ENST00000590499 BTNL8Q6UX41 500 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 GTSCR1Q86UQ5 136 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 PINX1Q96BK5 328 aaKnown RBP8.41□□□□□ -1.06
SMAD4-211ENST00000590499 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-211ENST00000590499 DAZ1Q9NQZ3 744 aaKnown RBP8.41□□□□□ -1.06
SMAD4-211ENST00000590499 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
SMAD4-211ENST00000590499 SHPKQ9UHJ6 478 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 SELENOKQ9Y6D0 94 aa8.41□□□□□ -1.06
SMAD4-211ENST00000590499 C15orf62A8K5M9 175 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 K7EMT4 169 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 CORTO00230 105 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 NUPL2O15504 423 aaKnown RBP8.4□□□□□ -1.06
SMAD4-211ENST00000590499 CD7P09564 240 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 SULT1A3P0DMM9 295 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 SULT1A4P0DMN0 295 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 CD81P60033 236 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM128Q5BJH2 165 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 LYZL2Q7Z4W2 148 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 TMED4Q7Z7H5 227 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 LGI3Q8N145 548 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 LRTM2Q8N967 370 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 TMEM170AQ8WVE7 144 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 OR10C1Q96KK4 312 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 NEURL2Q9BR09 285 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
SMAD4-211ENST00000590499 RYR3Q15413 4870 aa8.4□□□□□ -1.07
SMAD4-211ENST00000590499 IGHV3OR16-8A0A075B7F1 116 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 TRAV25A0A0B4J276 109 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 ANXA3P12429 323 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 BTCP35070 178 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 HTR2BP41595 481 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 CCR6P51684 374 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 SUB1P53999 127 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMAD4-211ENST00000590499 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-211ENST00000590499 PPP1R1AQ13522 171 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 RBMS2Q15434 407 aaKnown RBP8.39□□□□□ -1.07
SMAD4-211ENST00000590499 GUCA2BQ16661 112 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 ANKRD55Q3KP44 614 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 LINC00322Q6ZN03 302 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-211ENST00000590499 WWC2-AS2Q96NR7 200 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 C20orf24Q9BUV8 137 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 WFDC10AQ9H1F0 79 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 HSPB7Q9UBY9 170 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 CACFD1Q9UGQ2 172 aa8.39□□□□□ -1.07
SMAD4-211ENST00000590499 NAP1L6A6NFF2 107 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 ZNF207O43670 478 aaKnown RBP8.38□□□□□ -1.07
SMAD4-211ENST00000590499 GNG7O60262 68 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 PITX3O75364 302 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 NDUFB6O95139 128 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 SFT2D2O95562 160 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms