RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CT55Q8WUE5 264 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 OR5P3Q8WZ94 311 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 ROPN1LQ96C74 230 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 LINC00477Q96M19 166 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 SEC22CQ9BRL7 303 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 RNASE7Q9H1E1 156 aaKnown RBP2.63□□□□□ -1.99
SCAF11-210ENST00000547654 SLC23A2Q9UGH3 650 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 UTP11Q9Y3A2 253 aaKnown RBP2.63□□□□□ -1.99
SCAF11-210ENST00000547654 ADGRG4Q8IZF6 3080 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 COL6A6A6NMZ7 2263 aa2.63□□□□□ -1.99
SCAF11-210ENST00000547654 CSMD1Q96PZ7 3565 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 ANKRD12Q6UB98 2062 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 BAZ2AQ9UIF9 1905 aaKnown RBP2.62□□□□□ -1.99
SCAF11-210ENST00000547654 TRBV24-1A0A075B6N3 115 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 A0A0B4J2C4 111 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 H3BMM0 161 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 UBE2L6O14933 153 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 SLC25A20O43772 301 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 WISP3O95389 354 aaPredicted RBP2.62□□□□□ -1.99
SCAF11-210ENST00000547654 IFNA21P01568 189 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 SARNPP82979 210 aaKnown RBP2.62□□□□□ -1.99
SCAF11-210ENST00000547654 IL15RAQ13261 267 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 OR8G1Q15617 311 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 TSNQ15631 228 aaKnown RBP2.62□□□□□ -1.99
SCAF11-210ENST00000547654 AMTNQ6UX39 209 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 OR4K13Q8NH42 304 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 PYDC1Q8WXC3 89 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 KLK6Q92876 244 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 UBE2WQ96B02 151 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 NMNAT3Q96T66 252 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 TMEM147Q9BVK8 224 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 CCDC90BQ9GZT6 254 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 BIN3Q9NQY0 253 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 CISHQ9NSE2 258 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 COQ4Q9Y3A0 265 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 OR51B4Q9Y5P0 310 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 S4R3C0 116 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 OTOGQ6ZRI0 2925 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 NUP214P35658 2090 aaPredicted RBP2.62□□□□□ -1.99
SCAF11-210ENST00000547654 GREB1Q4ZG55 1949 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 TET1Q8NFU7 2136 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 PTPRQQ9UMZ3 2332 aa2.62□□□□□ -1.99
SCAF11-210ENST00000547654 PDZD2O15018 2839 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 COL5A1P20908 1838 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 TRAV26-2A0A0B4J265 109 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 A0A1B0GW54 56 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ZNF98A6NK75 572 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 IGHG2P01859 326 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 SERPINE1P05121 402 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 CRYGDP07320 174 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ZNF705DP0CH99 300 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 IFI30P13284 250 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 HSPE1P61604 102 aaKnown RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 TNFAIP6P98066 277 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 RUNX1Q01196 453 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 EIF4EBP2Q13542 120 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 KRTAP21-3Q3LHN1 58 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 LDLRAD2Q5SZI1 272 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 C10orf91Q5T1B1 145 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 C16orf47Q6ZP98 133 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 Q6ZQT7 251 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 TMPPEQ6ZT21 453 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 C3orf22Q8N5N4 141 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ZFAND2AQ8N6M9 145 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 GDPD1Q8N9F7 314 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 OR8B12Q8NGG6 310 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 OR52L1Q8NGH7 329 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 KLF14Q8TD94 323 aaPredicted RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ZNF721Q8TF20 911 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 MGLLQ99685 303 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 BATF3Q9NR55 127 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 TAAR3PQ9P1P4 343 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 KLK12Q9UKR0 248 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 PYCARDQ9ULZ3 195 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 UFC1Q9Y3C8 167 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 U3KQK5 164 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ABCA2Q9BZC7 2435 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 FBN1P35555 2871 aaKnown RBP2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ASXL3Q9C0F0 2248 aa2.61□□□□□ -1.99
SCAF11-210ENST00000547654 ACACAQ13085 2346 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 KIF26AQ9ULI4 1882 aaPredicted RBP2.6□□□□□ -1.99
SCAF11-210ENST00000547654 MYH3P11055 1940 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 IGLV3-12A0A075B6K2 115 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 PIRO00625 290 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 PFN1P07737 140 aaKnown RBP2.6□□□□□ -1.99
SCAF11-210ENST00000547654 SULT1A3P0DMM9 295 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 SULT1A4P0DMN0 295 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 ZNF140P52738 457 aaPredicted RBP2.6□□□□□ -1.99
SCAF11-210ENST00000547654 DEFA1P59665 94 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 TBPL1P62380 186 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 GNG3P63215 75 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 MRPL51Q4U2R6 128 aaKnown RBP2.6□□□□□ -1.99
SCAF11-210ENST00000547654 TNFAIP8L3Q5GJ75 292 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 SMARCD3Q6STE5 483 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 H1FOOQ8IZA3 346 aaPredicted RBP2.6□□□□□ -1.99
SCAF11-210ENST00000547654 STX19Q8N4C7 294 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 DAND5Q8N907 189 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 OR11H6Q8NGC7 330 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 DYDC1Q8WWB3 177 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms