RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SMIM27A0A1W2PRY6 76 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 NKX6-3A6NJ46 265 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 C12orf77C9JDV5 145 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 INAFM1C9JVW0 142 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 SMPD2O60906 423 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 HSBP1O75506 76 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 CBLN1P23435 193 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 HSPE1P61604 102 aaKnown RBP8.54□□□□□ -1.04
CHFR-219ENST00000541341 EFNB3Q15768 340 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 CLEC12BQ2HXU8 276 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 CR1LQ2VPA4 569 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 ZNF439Q8NDP4 499 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 MRGPRDQ8TDS7 321 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 GATAD1Q8WUU5 269 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 CACNG8Q8WXS5 425 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 BCL2L2Q92843 193 aaPredicted RBP8.54□□□□□ -1.04
CHFR-219ENST00000541341 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 GPHA2Q96T91 129 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 FGF23Q9GZV9 251 aaPredicted RBP8.54□□□□□ -1.04
CHFR-219ENST00000541341 ST20Q9HBF5 79 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 OBP2BQ9NPH6 170 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 BEX4Q9NWD9 120 aaPredicted RBP8.54□□□□□ -1.04
CHFR-219ENST00000541341 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
CHFR-219ENST00000541341 V9GYV3 84 aa8.54□□□□□ -1.04
CHFR-219ENST00000541341 ANK3Q12955 4377 aaKnown RBP8.54□□□□□ -1.04
CHFR-219ENST00000541341 IGHV2-26A0A0B4J1V2 119 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 TRAV38-1A0A0B4J264 116 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 C17orf98A8MV24 154 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 CRYAAP02489 173 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
CHFR-219ENST00000541341 TNFSF4P23510 183 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 DUTP33316 252 aaKnown RBP8.53□□□□□ -1.04
CHFR-219ENST00000541341 VDAC2P45880 294 aaPredicted RBP8.53□□□□□ -1.04
CHFR-219ENST00000541341 PPOXP50336 477 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 POU2AF1Q16633 256 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 PRSS8Q16651 343 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 IBA57Q5T440 356 aaKnown RBP8.53□□□□□ -1.04
CHFR-219ENST00000541341 ALKBH2Q6NS38 261 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 Q6ZT83 130 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 MAPK1IP1LQ8NDC0 245 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 OR1L4Q8NGR5 311 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
CHFR-219ENST00000541341 CCL19Q99731 98 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 GNB4Q9HAV0 340 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 IL36RNQ9UBH0 155 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 PROCRQ9UNN8 238 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 PRR14LQ5THK1 2151 aa8.53□□□□□ -1.04
CHFR-219ENST00000541341 A0A096LPE4 126 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 A0A1W2PR80 420 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 A0A1W2PS18 150 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 FAM231BA6NCW3 169 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 RAMP3O60896 148 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 HYPMO75409 117 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 NPSP0C0P6 89 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 WNT5AP41221 380 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 BATFQ16520 125 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 C22orf34Q6ZV56 151 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 OR8I2Q8N0Y5 310 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 GCSAMQ8N6F7 178 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 Q8N7P7 452 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 C1orf162Q8NEQ5 155 aaPredicted RBP8.52□□□□□ -1.05
CHFR-219ENST00000541341 GRAMD2BQ96HH9 432 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 MGST2Q99735 147 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 MS4A6AQ9H2W1 248 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 C12orf49Q9H741 205 aa8.52□□□□□ -1.05
CHFR-219ENST00000541341 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.05
CHFR-219ENST00000541341 GRIFINA4D1Z8 144 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 DEFB108AA8MXU0 73 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 C22orf46C9J442 243 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 PRSS46E5RG02 174 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 MGST3O14880 152 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 TCF21O43680 179 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 OR2J3O76001 311 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 USF1P22415 310 aaPredicted RBP8.51□□□□□ -1.05
CHFR-219ENST00000541341 TSPOP30536 169 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 SUB1P53999 127 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHFR-219ENST00000541341 BPIFB3P59826 476 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 PRR20EP86478 221 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 PRR20CP86479 221 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 PRR20DP86480 221 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 PRR20BP86481 221 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 PRR20AP86496 221 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 LRRC10Q5BKY1 277 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 CT83Q5H943 113 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 ZNF474Q6S9Z5 364 aaPredicted RBP8.51□□□□□ -1.05
CHFR-219ENST00000541341 ACP7Q6ZNF0 438 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 OR4C5Q8NGB2 326 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 NEUROG1Q92886 237 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 TMEM191AQ9H0A3 160 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 MS4A5Q9H3V2 200 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 TCF19Q9Y242 345 aa8.51□□□□□ -1.05
CHFR-219ENST00000541341 KIAA2026Q5HYC2 2103 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms