RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 DEDD2Q8WXF8 326 aa14.31□□□□□ -0.12
RAB35-204ENST00000540803 SPAG8Q99932 426 aaPredicted RBP14.31□□□□□ -0.12
RAB35-204ENST00000540803 SMPXQ9UHP9 88 aa14.31□□□□□ -0.12
RAB35-204ENST00000540803 STARD9Q9P2P6 4700 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 A0A0B4J2A0 478 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 IGHV7-4-1A0A0J9YVY3 117 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 NXPH3O95157 252 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 TMEM50AO95807 157 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 SULT1A3P0DMM9 295 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 SULT1A4P0DMN0 295 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 ANXA3P12429 323 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 OPRK1P41145 380 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 HTR2BP41595 481 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 MLANAQ16655 118 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 NMSQ5H8A3 153 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 LAMTOR1Q6IAA8 161 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 LYZL2Q7Z4W2 148 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 TMED4Q7Z7H5 227 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 CITED4Q96RK1 184 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 HEYLQ9NQ87 328 aaPredicted RBP14.3□□□□□ -0.12
RAB35-204ENST00000540803 SHPKQ9UHJ6 478 aa14.3□□□□□ -0.12
RAB35-204ENST00000540803 RYR3Q15413 4870 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 CSMD3Q7Z407 3707 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 CEBPZOSA8MTT3 80 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 CHEK1O14757 476 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 TOMM20LQ6UXN7 152 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 LGI3Q8N145 548 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 TMEM116Q8NCL8 245 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 RNF2Q99496 336 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 HIPK2Q9H2X6 1198 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 RETNQ9HD89 108 aa14.29□□□□□ -0.12
RAB35-204ENST00000540803 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 TRAV14DV4A0A0A6YYC5 116 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 C3orf84H3BNL1 204 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 CLN5O75503 358 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 CCR6P51684 374 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 SRPXP78539 464 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 C2orf83Q53S99 150 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 TMEM128Q5BJH2 165 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 ZNF600Q6ZNG1 722 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 SLC24A4Q8NFF2 622 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 OR4X1Q8NH49 305 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 MUC7Q8TAX7 377 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 TMEM170AQ8WVE7 144 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 SLC25A21Q9BQT8 299 aaPredicted RBP14.28□□□□□ -0.12
RAB35-204ENST00000540803 RHPN1-AS1Q9BWJ2 59 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 ZFAND3Q9H8U3 227 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 EDA2RQ9HAV5 297 aa14.28□□□□□ -0.12
RAB35-204ENST00000540803 PUS1Q9Y606 427 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAB35-204ENST00000540803 A0A1B0GU03 582 aa14.27□□□□□ -0.13
RAB35-204ENST00000540803 SMCO1Q147U7 214 aa14.27□□□□□ -0.13
RAB35-204ENST00000540803 BAK1Q16611 211 aa14.27□□□□□ -0.13
RAB35-204ENST00000540803 HSPB7Q9UBY9 170 aa14.27□□□□□ -0.13
RAB35-204ENST00000540803 CACFD1Q9UGQ2 172 aa14.27□□□□□ -0.13
RAB35-204ENST00000540803 UBQLN2Q9UHD9 624 aa14.27□□□□□ -0.13
RAB35-204ENST00000540803 DYNC2H1Q8NCM8 4307 aaKnown RBP14.27□□□□□ -0.13
RAB35-204ENST00000540803 IGHV3OR16-13A0A075B7E8 117 aa14.26□□□□□ -0.13
RAB35-204ENST00000540803 IGHV3-74A0A0B4J1X5 117 aa14.26□□□□□ -0.13
RAB35-204ENST00000540803 TNFRSF9Q07011 255 aa14.26□□□□□ -0.13
RAB35-204ENST00000540803 SDHCQ99643 169 aaPredicted RBP14.26□□□□□ -0.13
RAB35-204ENST00000540803 GINS3Q9BRX5 216 aa14.26□□□□□ -0.13
RAB35-204ENST00000540803 RPS10-NUDT3A0A1W2PQS6 291 aa14.25□□□□□ -0.13
RAB35-204ENST00000540803 APOHP02749 345 aaPredicted RBP14.25□□□□□ -0.13
RAB35-204ENST00000540803 ODF3L2Q3SX64 289 aa14.25□□□□□ -0.13
RAB35-204ENST00000540803 FAM90A2PQ658T7 463 aa14.25□□□□□ -0.13
RAB35-204ENST00000540803 RNASEH2CQ8TDP1 164 aaKnown RBP14.25□□□□□ -0.13
RAB35-204ENST00000540803 FAM110AQ9BQ89 295 aa14.25□□□□□ -0.13
RAB35-204ENST00000540803 SACSQ9NZJ4 4579 aa14.25□□□□□ -0.13
RAB35-204ENST00000540803 LOC102724200A0A096LPH7 203 aaPredicted RBP14.24□□□□□ -0.13
RAB35-204ENST00000540803 DUXBA0A1W2PPF3 345 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 OR4C46A6NHA9 309 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 IGKV1-17P01599 117 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 VAMP1P23763 118 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 NPY1RP25929 384 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 PPP1R1AQ13522 171 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 RBMS2Q15434 407 aaKnown RBP14.24□□□□□ -0.13
RAB35-204ENST00000540803 TRIQKQ629K1 86 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 PRSS54Q6PEW0 395 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 ST8SIA2Q92186 375 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 GGTLC1Q9BX51 225 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 RBKSQ9H477 322 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 VSIRQ9H7M9 311 aa14.24□□□□□ -0.13
RAB35-204ENST00000540803 PIGBOS1A0A0B4J2F0 54 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 PITX3O75364 302 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 SFT2D2O95562 160 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 TIGITQ495A1 244 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 CASC10Q5T4H9 136 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 CENPSQ8N2Z9 138 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 LILRB2Q8N423 598 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 DTD1Q8TEA8 209 aa14.23□□□□□ -0.13
RAB35-204ENST00000540803 TRAV30A0A087WSZ9 112 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 IGHV3-66A0A0C4DH42 116 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 SCGB2A1O75556 95 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 IGLC1P0CG04 106 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 SLC25A4P12235 298 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 INPP1P49441 399 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 RND2P52198 227 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 TCF24Q7RTU0 167 aa14.22□□□□□ -0.13
RAB35-204ENST00000540803 NOXA1Q86UR1 476 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms