RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 BHLHA15Q7RTS1 189 aaPredicted RBP11.49□□□□□ -0.57
LIG1-203ENST00000536218 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
LIG1-203ENST00000536218 COMMD5Q9GZQ3 224 aa11.49□□□□□ -0.57
LIG1-203ENST00000536218 HES4Q9HCC6 221 aa11.49□□□□□ -0.57
LIG1-203ENST00000536218 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
LIG1-203ENST00000536218 HILPDAQ9Y5L2 63 aa11.49□□□□□ -0.57
LIG1-203ENST00000536218 IQCF6A8MYZ5 107 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 J3QR06 171 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 HTR1DP28221 377 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 CAMPP49913 170 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 MIC13Q5XKP0 118 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 IGF2-ASQ6U949 168 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 ASCL5Q7RTU5 278 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 PERPQ96FX8 193 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 JMJD8Q96S16 334 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 GCM1Q9NP62 436 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 LIN7CQ9NUP9 197 aaKnown RBP11.48□□□□□ -0.57
LIG1-203ENST00000536218 PLCE1Q9P212 2302 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
LIG1-203ENST00000536218 SSX8Q7RTT4 187 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 TPRX1Q8N7U7 411 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
LIG1-203ENST00000536218 HELTA6NFD8 242 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 M0R1B8 84 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 CXorf1O96002 111 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 MFAP2P55001 183 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
LIG1-203ENST00000536218 FOXC1Q12948 553 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 FOXE3Q13461 319 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 FAM53AQ6NSI3 398 aaPredicted RBP11.47□□□□□ -0.57
LIG1-203ENST00000536218 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
LIG1-203ENST00000536218 OR2K2Q8NGT1 345 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 PSPNO60542 156 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 CRYBB3P26998 211 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 CD1BP29016 333 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 CRYBA4P53673 196 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 TCTAP57738 103 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 CKS1BP61024 79 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
LIG1-203ENST00000536218 TIGITQ495A1 244 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 Q6ZR03 302 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 ZNF718Q3SXZ3 478 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 UFSP1Q6NVU6 142 aa11.47□□□□□ -0.57
LIG1-203ENST00000536218 NBL1P41271 181 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 AESQ08117 197 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 ZNF474Q6S9Z5 364 aaPredicted RBP11.46□□□□□ -0.57
LIG1-203ENST00000536218 ZNF788Q6ZQV5 615 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 Q6ZS92 163 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 LINC00596Q86U02 117 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 ZNF808Q8N4W9 903 aaPredicted RBP11.46□□□□□ -0.57
LIG1-203ENST00000536218 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
LIG1-203ENST00000536218 PPIAL4EA0A075B759 164 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.46□□□□□ -0.58
LIG1-203ENST00000536218 PMS2P5A8MQ11 134 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 FOXH1O75593 365 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 CGAP01215 116 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 PPIAL4FP0DN26 164 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 ERVK11-1P61568 191 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 COX19Q49B96 90 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 WDR82Q6UXN9 313 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 Q6ZS49 121 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 TCF24Q7RTU0 167 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 OR2Z1Q8NG97 314 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 OR10AG1Q8NH19 301 aa11.46□□□□□ -0.58
LIG1-203ENST00000536218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
LIG1-203ENST00000536218 HIST1H1EP10412 219 aaKnown RBP11.45□□□□□ -0.58
LIG1-203ENST00000536218 GCHFRP30047 84 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 BPIFA4PQ86YQ2 179 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 TXNDC17Q9BRA2 123 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 SAP30LQ9HAJ7 183 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 SYS1-DBNDD2H3BUS1 97 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 STAG3L2P0CL84 134 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 MC5RP33032 325 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 FOXA3P55318 350 aaPredicted RBP11.45□□□□□ -0.58
LIG1-203ENST00000536218 IBA57Q5T440 356 aaKnown RBP11.45□□□□□ -0.58
LIG1-203ENST00000536218 Q8IYB0 196 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.45□□□□□ -0.58
LIG1-203ENST00000536218 JKAMPQ9P055 326 aa11.45□□□□□ -0.58
LIG1-203ENST00000536218 LRRC30A6NM36 301 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 FAM90A26D6RGX4 464 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 K7EP34 96 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 ACTL6BO94805 426 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 NEGR1Q7Z3B1 354 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 ABHD17AQ96GS6 310 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 METRNQ9UJH8 293 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 SPCS1Q9Y6A9 102 aa11.44□□□□□ -0.58
LIG1-203ENST00000536218 MBD3L4A6NDZ8 208 aaPredicted RBP11.44□□□□□ -0.58
LIG1-203ENST00000536218 MBD3L3A6NE82 208 aaPredicted RBP11.44□□□□□ -0.58
LIG1-203ENST00000536218 MBD3L5A6NJ08 208 aaPredicted RBP11.44□□□□□ -0.58
LIG1-203ENST00000536218 IGLV2-14P01704 120 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms