RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 AKR1C4P17516 323 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 NOXA1Q86UR1 476 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 LGI3Q8N145 548 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 HEYLQ9NQ87 328 aaPredicted RBP15.45■□□□□ 0.06
VPS28-206ENST00000526734 SMPXQ9UHP9 88 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 IGHV7-4-1A0A0J9YVY3 117 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 DUXBA0A1W2PPF3 345 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 OR4C46A6NHA9 309 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 CD5P06127 495 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 OPRK1P41145 380 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 CCR6P51684 374 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 ZNF600Q6ZNG1 722 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 MUC7Q8TAX7 377 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 FAM110AQ9BQ89 295 aa15.44■□□□□ 0.06
VPS28-206ENST00000526734 CEBPZOSA8MTT3 80 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 SUPT4H1P63272 117 aaKnown RBP15.43■□□□□ 0.06
VPS28-206ENST00000526734 C2orf83Q53S99 150 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 TMEM128Q5BJH2 165 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 NMSQ5H8A3 153 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 TMEM116Q8NCL8 245 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 SLC24A4Q8NFF2 622 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 OR4X1Q8NH49 305 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 RNASEH2CQ8TDP1 164 aaKnown RBP15.43■□□□□ 0.06
VPS28-206ENST00000526734 HIPK2Q9H2X6 1198 aa15.43■□□□□ 0.06
VPS28-206ENST00000526734 TRAV30A0A087WSZ9 112 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 TRAV14DV4A0A0A6YYC5 116 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 CLN5O75503 358 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 TMEM50AO95807 157 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 IGHV3-48P01763 117 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 SLC25A4P12235 298 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 SMCO1Q147U7 214 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 ZNF414Q96IQ9 312 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 RHPN1-AS1Q9BWJ2 59 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 WFDC10AQ9H1F0 79 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 NDUFA13Q9P0J0 144 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 SELENOKQ9Y6D0 94 aa15.42■□□□□ 0.06
VPS28-206ENST00000526734 IGHV3OR16-8A0A075B7F1 116 aa15.41■□□□□ 0.06
VPS28-206ENST00000526734 RBMY1BA6NDE4 496 aaKnown RBP15.41■□□□□ 0.06
VPS28-206ENST00000526734 RBMY1EA6NEQ0 496 aaKnown RBP15.41■□□□□ 0.06
VPS28-206ENST00000526734 CHEK1O14757 476 aa15.41■□□□□ 0.06
VPS28-206ENST00000526734 ZNF207O43670 478 aaKnown RBP15.41■□□□□ 0.06
VPS28-206ENST00000526734 RBMY1DP0C7P1 496 aaKnown RBP15.41■□□□□ 0.06
VPS28-206ENST00000526734 CMC4P56277 68 aaPredicted RBP15.41■□□□□ 0.06
VPS28-206ENST00000526734 TMED4Q7Z7H5 227 aa15.41■□□□□ 0.06
VPS28-206ENST00000526734 GGTLC1Q9BX51 225 aa15.41■□□□□ 0.06
VPS28-206ENST00000526734 SRRQ9GZT4 340 aa15.41■□□□□ 0.06
VPS28-206ENST00000526734 FNDC4Q9H6D8 234 aaPredicted RBP15.41■□□□□ 0.06
VPS28-206ENST00000526734 A0A1B0GU03 582 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 INPP1P49441 399 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 ATP5IP56385 69 aaPredicted RBP15.4■□□□□ 0.06
VPS28-206ENST00000526734 TNFRSF9Q07011 255 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 ETFRF1Q6IPR1 90 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 TOMM20LQ6UXN7 152 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 TMEM231Q9H6L2 316 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 HSPB7Q9UBY9 170 aa15.4■□□□□ 0.06
VPS28-206ENST00000526734 HUWE1Q7Z6Z7 4374 aaKnown RBP15.39■□□□□ 0.05
VPS28-206ENST00000526734 LOC102724200A0A096LPH7 203 aaPredicted RBP15.39■□□□□ 0.05
VPS28-206ENST00000526734 NAP1L6A6NFF2 107 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 NPY1RP25929 384 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 RBMS2Q15434 407 aaKnown RBP15.39■□□□□ 0.05
VPS28-206ENST00000526734 TRIQKQ629K1 86 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 LYZL2Q7Z4W2 148 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 LRTM2Q8N967 370 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 EDA2RQ9HAV5 297 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 PUS1Q9Y606 427 aaKnown RBP eCLIP15.39■□□□□ 0.05
VPS28-206ENST00000526734 U3KQ87 197 aa15.39■□□□□ 0.05
VPS28-206ENST00000526734 UBE2MP61081 183 aaKnown RBP15.38■□□□□ 0.05
VPS28-206ENST00000526734 CENPSQ8N2Z9 138 aa15.38■□□□□ 0.05
VPS28-206ENST00000526734 RNF2Q99496 336 aa15.38■□□□□ 0.05
VPS28-206ENST00000526734 ZFAND3Q9H8U3 227 aa15.38■□□□□ 0.05
VPS28-206ENST00000526734 PRR13Q9NZ81 148 aa15.38■□□□□ 0.05
VPS28-206ENST00000526734 SLC25A6P12236 298 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 LYL1P12980 280 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 VAMP1P23763 118 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 PAFAH1B2P68402 229 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 OR1S2Q8NGQ3 325 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 OR1S1Q8NH92 325 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 DTD1Q8TEA8 209 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 VSIRQ9H7M9 311 aa15.37■□□□□ 0.05
VPS28-206ENST00000526734 A0A1W2PS18 150 aa15.36■□□□□ 0.05
VPS28-206ENST00000526734 APOC4P55056 127 aa15.36■□□□□ 0.05
VPS28-206ENST00000526734 NARS2Q96I59 477 aaKnown RBP15.36■□□□□ 0.05
VPS28-206ENST00000526734 TMED3Q9Y3Q3 217 aa15.36■□□□□ 0.05
VPS28-206ENST00000526734 TRAV2A0A0B4J234 112 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 FAM90A26D6RGX4 464 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 SFT2D2O95562 160 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 IFNA10P01566 189 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 NPPCP23582 126 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 ODF3L2Q3SX64 289 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 FAM90A2PQ658T7 463 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 METTL26Q96S19 204 aa15.35■□□□□ 0.05
VPS28-206ENST00000526734 MRPL36Q9P0J6 103 aaKnown RBP15.35■□□□□ 0.05
VPS28-206ENST00000526734 CENPXA8MT69 81 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 IGKV1-17P01599 117 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 IGLC1P0CG04 106 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 RND2P52198 227 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 YPEL3P61236 119 aaPredicted RBP15.34■□□□□ 0.05
VPS28-206ENST00000526734 MLANAQ16655 118 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 CASC10Q5T4H9 136 aa15.34■□□□□ 0.05
VPS28-206ENST00000526734 PRSS54Q6PEW0 395 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms