RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 IGHV3-21A0A0B4J1V1 117 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 A0A1B0GUS0 222 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 TMEM89A2RUT3 159 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 PMS2P5A8MQ11 134 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 CYB5BO43169 146 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 OR2J3O76001 311 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 TSPAN15O95858 294 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 TRGV3P03979 118 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 ELANEP08246 267 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 METTL15P1P0C7V9 234 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 GYPEP15421 78 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 HIST1H1BP16401 226 aaKnown RBP5.9□□□□□ -1.46
CCDC93-207ENST00000474006 NPY1RP25929 384 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 PSMB8P28062 276 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 PROK1P58294 105 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 NHLH2Q02577 135 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 FOXL1Q12952 345 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 FOXE3Q13461 319 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 KIAA0141Q14154 515 aaPredicted RBP5.9□□□□□ -1.46
CCDC93-207ENST00000474006 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 GAGE13Q4V321 117 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 TMEM65Q6PI78 240 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 ZNF546Q86UE3 836 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 TMEM252Q8N6L7 170 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 NECAP1Q8NC96 275 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 RNASEH2CQ8TDP1 164 aaKnown RBP5.9□□□□□ -1.46
CCDC93-207ENST00000474006 WIPF2Q8TF74 440 aaPredicted RBP5.9□□□□□ -1.46
CCDC93-207ENST00000474006 DCUN1D4Q92564 292 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 SLC25A31Q9H0C2 315 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 LYRM2Q9NU23 88 aaPredicted RBP5.9□□□□□ -1.46
CCDC93-207ENST00000474006 THYN1Q9P016 225 aa5.9□□□□□ -1.46
CCDC93-207ENST00000474006 SETD2Q9BYW2 2564 aaPredicted RBP5.9□□□□□ -1.47
CCDC93-207ENST00000474006 FXYD6-FXYD2A0A087WZ82 144 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 IGSF23A1L1A6 192 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 H3BUA1 57 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 I3L2K1 104 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 CST7O76096 145 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 MT-CO2P00403 227 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 IGHV3-48P01763 117 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 OR8U8P0C7N1 319 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 CD28P10747 220 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 RPL12P30050 165 aaKnown RBP5.89□□□□□ -1.47
CCDC93-207ENST00000474006 GPX4P36969 197 aaPredicted RBP5.89□□□□□ -1.47
CCDC93-207ENST00000474006 SULT1A1P50225 295 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 TPPP2P59282 170 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 KRTAP10-3P60369 221 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 RHOGP84095 191 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 ATP5G2Q06055 141 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 ARL16Q0P5N6 197 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 TCTEX1D4Q5JR98 221 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 OR8G2PQ6IF36 304 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 COMMD1Q8N668 190 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 RNF152Q8N8N0 203 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 C11orf44Q8N8P7 122 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 INO80EQ8NBZ0 244 aaPredicted RBP5.89□□□□□ -1.47
CCDC93-207ENST00000474006 PINX1Q96BK5 328 aaKnown RBP5.89□□□□□ -1.47
CCDC93-207ENST00000474006 BSCL2Q96G97 398 aaPredicted RBP5.89□□□□□ -1.47
CCDC93-207ENST00000474006 USMG5Q96IX5 58 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 C19orf24Q9BVV8 132 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 SLA2Q9H6Q3 261 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 JMJD1CQ15652 2540 aa5.89□□□□□ -1.47
CCDC93-207ENST00000474006 A0A0G2JLM5 398 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 TCRBV4S1A1TA0A5B7 111 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 FAM223BA6NKX1 122 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 HMSDA8MTL9 139 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 PRSS46E5RG02 174 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 K7EIM0 57 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 C1QBP02746 253 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 S100A11P31949 105 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 NUP62P37198 522 aaPredicted RBP5.88□□□□□ -1.47
CCDC93-207ENST00000474006 OPRK1P41145 380 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 AP2S1P53680 142 aaPredicted RBP5.88□□□□□ -1.47
CCDC93-207ENST00000474006 LINC00310P59036 64 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 DEFA5Q01523 94 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 EWSR1Q01844 656 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCDC93-207ENST00000474006 EXOSC2Q13868 293 aaKnown RBP5.88□□□□□ -1.47
CCDC93-207ENST00000474006 C15orf32Q32M92 178 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 AWAT1Q58HT5 328 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 HIST2H2BDQ6DRA6 164 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 HAPLN4Q86UW8 402 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 FAM223AQ8IWN6 122 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 TMEM217Q8N7C4 229 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 ZNF491Q8N8L2 437 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 OR10P1Q8NGE3 313 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 OR4X2Q8NGF9 303 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 SCARB1Q8WTV0 552 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 CACNG8Q8WXS5 425 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 TMEM158Q8WZ71 300 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 AQP10Q96PS8 301 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 FNDC4Q9H6D8 234 aaPredicted RBP5.88□□□□□ -1.47
CCDC93-207ENST00000474006 ZC4H2Q9NQZ6 224 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 TNFSF18Q9UNG2 199 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 S4R3C0 116 aa5.88□□□□□ -1.47
CCDC93-207ENST00000474006 FBN1P35555 2871 aaKnown RBP5.87□□□□□ -1.47
CCDC93-207ENST00000474006 MFSD2BA6NFX1 497 aa5.87□□□□□ -1.47
CCDC93-207ENST00000474006 CORTO00230 105 aa5.87□□□□□ -1.47
CCDC93-207ENST00000474006 ARPC5O15511 151 aa5.87□□□□□ -1.47
CCDC93-207ENST00000474006 IGHV3-11P01762 117 aa5.87□□□□□ -1.47
CCDC93-207ENST00000474006 IGHV3-23P01764 117 aa5.87□□□□□ -1.47
CCDC93-207ENST00000474006 CLEC3BP05452 202 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms