RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 HTR1DP28221 377 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 POU2AF1Q16633 256 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 JMJD8Q96S16 334 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 SAP30LQ9HAJ7 183 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 GABRG2P18507 467 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 OR1C1Q15619 314 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 ZNF788Q6ZQV5 615 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 ST20Q9HBF5 79 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 TRGV10A0A0A0MS01 117 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 HTN1P15515 57 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.18□□□□□ -1.42
CPSF6-202ENST00000435070 POLDIP2Q9Y2S7 368 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 RPS20P60866 119 aaKnown RBP6.18□□□□□ -1.42
CPSF6-202ENST00000435070 NFAM1Q8NET5 270 aaPredicted RBP6.18□□□□□ -1.42
CPSF6-202ENST00000435070 COMMD5Q9GZQ3 224 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 PGPEP1Q9NXJ5 209 aa6.18□□□□□ -1.42
CPSF6-202ENST00000435070 C22orf46C9J442 243 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
CPSF6-202ENST00000435070 SLC25A53Q5H9E4 307 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 REG1AP05451 166 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 OR9G9P0C7N8 305 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 OR2K2Q8NGT1 345 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 SLC25A40Q8TBP6 338 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 TPRP12270 2363 aaKnown RBP6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A10PA6NDY2 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A18PA6NE21 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A16PA6NEW6 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A20PA6NIJ5 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A8PA6NJQ4 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A7PA6NKC0 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A22PA8MWA6 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A12PA8MX19 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A5PA8MXJ8 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A23PA8MXZ1 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A15PP0C7V4 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A13PP0C7W8 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A14PP0C7W9 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FAM90A24PP0C7X0 464 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 COX7A1P24310 79 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 TAS2R45P59539 299 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 C5orf30Q96GV9 206 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 J3KRW8 73 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FCGR3BO75015 233 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 CCL3P10147 92 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
CPSF6-202ENST00000435070 CFHR1Q03591 330 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 CEACAM21Q3KPI0 293 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 TEX29Q8N6K0 151 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 TEX45Q8NA69 505 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 LSM4Q9Y4Z0 139 aaKnown RBP6.17□□□□□ -1.42
CPSF6-202ENST00000435070 IZUMO1RA6ND01 250 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 C9JCJ5 164 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 SRFP11831 508 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 OPRK1P41145 380 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 FOXG1P55316 489 aaPredicted RBP6.17□□□□□ -1.42
CPSF6-202ENST00000435070 TCF24Q7RTU0 167 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 TXNDC17Q9BRA2 123 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 EDA2RQ9HAV5 297 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 OSTCQ9NRP0 149 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 PSG11Q9UQ72 335 aa6.17□□□□□ -1.42
CPSF6-202ENST00000435070 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.16□□□□□ -1.42
CPSF6-202ENST00000435070 IGFBP2P18065 325 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 BRWD1-AS2P59051 145 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 TMEM240Q5SV17 173 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 SF3B5Q9BWJ5 86 aaKnown RBP6.16□□□□□ -1.42
CPSF6-202ENST00000435070 PPIAL4CA0A0B4J2A2 164 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 LINC00473A8K010 186 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 OR2H2O95918 312 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 PPIAL4GP0DN37 164 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 TNRC6AQ8NDV7 1962 aaKnown RBP6.16□□□□□ -1.42
CPSF6-202ENST00000435070 COL4A2P08572 1712 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 TRAV3A0A0B4J244 114 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 TEX48A0A1B0GUV7 120 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 C1orf53Q5VUE5 145 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 NUP35Q8NFH5 326 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 C9orf172C9J069 976 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 ORM1P02763 201 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 CEACAM3P40198 252 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 CCL17Q92583 94 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 SPCS1Q9Y6A9 102 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 TRGV5A0A0B4J1U4 118 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 A0A1W2PRE2 83 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 PRB4P10163 310 aaPredicted RBP6.16□□□□□ -1.42
CPSF6-202ENST00000435070 HIST1H1AQ02539 215 aaPredicted RBP6.16□□□□□ -1.42
CPSF6-202ENST00000435070 SPEM1Q8N4L4 309 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 URB1-AS1Q96HZ7 61 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 ADTRPQ96IZ2 230 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 OR51B2Q9Y5P1 312 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 HCFC1P51610 2035 aa6.16□□□□□ -1.42
CPSF6-202ENST00000435070 GGTLC3B5MD39 225 aa6.15□□□□□ -1.42
CPSF6-202ENST00000435070 DNAL4O96015 105 aa6.15□□□□□ -1.42
CPSF6-202ENST00000435070 HBZP02008 142 aa6.15□□□□□ -1.42
CPSF6-202ENST00000435070 COX19Q49B96 90 aa6.15□□□□□ -1.42
CPSF6-202ENST00000435070 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.42
CPSF6-202ENST00000435070 SRSF7Q16629 238 aaKnown RBP eCLIP6.15□□□□□ -1.428e-10■■■■□ 21.9
CPSF6-202ENST00000435070 WIPI1Q5MNZ9 446 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms