RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 IGKV1D-13A0A0B4J2D9 117 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 IGKV1-13P0DP09 117 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 RPS20P60866 119 aaKnown RBP10.95□□□□□ -0.66
SPG11-202ENST00000427534 CNTFRP26992 372 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 IQCF6A8MYZ5 107 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 MRPL16Q9NX20 251 aaKnown RBP10.94□□□□□ -0.66
SPG11-202ENST00000427534 ZNF688P0C7X2 276 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 MBNL3Q9NUK0 354 aaKnown RBP10.94□□□□□ -0.66
SPG11-202ENST00000427534 BPESC1Q9GZL8 116 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 TMEM50AO95807 157 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 DEFB130BP0DP73 79 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 DEFB130AP0DP74 79 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 FABP2P12104 132 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 PLP1P60201 277 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 TM2D1Q9BX74 207 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 ARID2Q68CP9 1835 aa10.94□□□□□ -0.66
SPG11-202ENST00000427534 LILRA1O75019 489 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
SPG11-202ENST00000427534 RTN4RL2Q86UN3 420 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
SPG11-202ENST00000427534 TRGV1A0A0A0MS02 117 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 E9PLN8 166 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
SPG11-202ENST00000427534 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 Q5PR19 223 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 VKORC1Q9BQB6 163 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 OR9G9P0C7N8 305 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 HBBP68871 147 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 C2orf68Q2NKX9 166 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 TMEM200BQ69YZ2 307 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 CEP290O15078 2479 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 IGLV3-12A0A075B6K2 115 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
SPG11-202ENST00000427534 PAX8Q06710 450 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 NHLRC3Q5JS37 347 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 LYPD2Q6UXB3 125 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 FCN3O75636 299 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 RPRMLQ8N4K4 120 aa10.93□□□□□ -0.66
SPG11-202ENST00000427534 GREB1Q4ZG55 1949 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 TM4SF5O14894 197 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 CD8AP01732 235 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 DANCRP0C864 163 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 RAB9AP51151 201 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 POLEQ07864 2286 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 TRAV41A0A0B4J266 112 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 CSRP1P21291 193 aaKnown RBP10.92□□□□□ -0.66
SPG11-202ENST00000427534 TDGF1P3P51864 188 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 MORN2Q502X0 79 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 WBP1Q96G27 269 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 NEUROG3Q9Y4Z2 214 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 ZNF414Q96IQ9 312 aa10.92□□□□□ -0.66
SPG11-202ENST00000427534 MRPL32Q9BYC8 188 aaKnown RBP10.92□□□□□ -0.66
SPG11-202ENST00000427534 TMEM183AQ8IXX5 376 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 IGFBPL1Q8WX77 278 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 KLHDC3Q9BQ90 382 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 NXT2Q9NPJ8 142 aaKnown RBP10.91□□□□□ -0.66
SPG11-202ENST00000427534 A0A096LPF7 62 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 IGHV2-26A0A0B4J1V2 119 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 A0A1B0GTI1 187 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 C19orf24Q9BVV8 132 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 LOC285556D6RIA3 1793 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 FOLR2P14207 255 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 C15orf32Q32M92 178 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 RPUSD1Q9UJJ7 312 aaKnown RBP10.91□□□□□ -0.66
SPG11-202ENST00000427534 LYPD3O95274 346 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 STAG3L2P0CL84 134 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 OSR1Q8TAX0 266 aaPredicted RBP10.91□□□□□ -0.66
SPG11-202ENST00000427534 ZNF319Q9P2F9 582 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 TRAV2A0A0B4J234 112 aa10.91□□□□□ -0.66
SPG11-202ENST00000427534 PQLC2LA1A4F0 135 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 CD28P10747 220 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 ZFP36L1Q07352 338 aaKnown RBP10.9□□□□□ -0.66
SPG11-202ENST00000427534 EXOC3-AS1Q8N2X6 119 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 H7C1H1 209 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 MT-ND6P03923 174 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 CDC42EP3Q9UKI2 254 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 LOC102723996A0A087X1L8 192 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 MST1P26927 711 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 PKIAP61925 76 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 SAPCD1Q5SSQ6 148 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
SPG11-202ENST00000427534 RTBDNQ9BSG5 229 aaPredicted RBP10.9□□□□□ -0.66
SPG11-202ENST00000427534 IGFBP3P17936 291 aaPredicted RBP10.9□□□□□ -0.67
SPG11-202ENST00000427534 TMEM249Q2WGJ8 235 aa10.9□□□□□ -0.67
SPG11-202ENST00000427534 FAM90A1Q86YD7 464 aa10.9□□□□□ -0.67
SPG11-202ENST00000427534 MRPS18CQ9Y3D5 142 aaKnown RBP10.9□□□□□ -0.67
SPG11-202ENST00000427534 TRAV21A0A0B4J279 112 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms