RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CELA1Q9UNI1 258 aa15.25■□□□□ 0.03
TRAF4-203ENST00000394925 DYNC1H1Q14204 4646 aaKnown RBP15.24■□□□□ 0.03
TRAF4-203ENST00000394925 DEFB131BA0A096LNP1 70 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 PRSS29PA6NIE9 313 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 M0R2N4 97 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 TMEM127O75204 238 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 P2RY1P47900 373 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 PPP5CP53041 499 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 SAMD12Q8N8I0 201 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 METTL26Q96S19 204 aa15.24■□□□□ 0.03
TRAF4-203ENST00000394925 TGFBR1P36897 503 aa15.23■□□□□ 0.03
TRAF4-203ENST00000394925 C12orf74Q32Q52 190 aa15.23■□□□□ 0.03
TRAF4-203ENST00000394925 POM121L12Q8N7R1 296 aa15.23■□□□□ 0.03
TRAF4-203ENST00000394925 CSNK1G2-AS1Q8NCQ2 148 aa15.23■□□□□ 0.03
TRAF4-203ENST00000394925 MRPL36Q9P0J6 103 aaKnown RBP15.23■□□□□ 0.03
TRAF4-203ENST00000394925 PKD1P98161 4303 aa15.23■□□□□ 0.03
TRAF4-203ENST00000394925 DNAH11Q96DT5 4516 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 RTL8CO15255 209 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 AMBPP02760 352 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 P0DMU3 169 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 FAM231AP0DMU4 169 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 FAM231CP0DMU5 169 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 CRYBB3P26998 211 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 SLC35G3Q8N808 338 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 DCANP1Q8TF63 244 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 TMEM230Q96A57 120 aa15.22■□□□□ 0.03
TRAF4-203ENST00000394925 YTHDF1Q9BYJ9 559 aaKnown RBP15.22■□□□□ 0.03
TRAF4-203ENST00000394925 IFNA17P01571 189 aa15.21■□□□□ 0.03
TRAF4-203ENST00000394925 NEDD8Q15843 81 aa15.21■□□□□ 0.03
TRAF4-203ENST00000394925 MLANAQ16655 118 aa15.21■□□□□ 0.03
TRAF4-203ENST00000394925 CROCCP3Q8IVE0 287 aa15.21■□□□□ 0.03
TRAF4-203ENST00000394925 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
TRAF4-203ENST00000394925 SCRT1Q9BWW7 348 aa15.21■□□□□ 0.03
TRAF4-203ENST00000394925 CORTO00230 105 aa15.2■□□□□ 0.02
TRAF4-203ENST00000394925 CLN5O75503 358 aa15.2■□□□□ 0.02
TRAF4-203ENST00000394925 IGKV1-5P01602 117 aa15.2■□□□□ 0.02
TRAF4-203ENST00000394925 RNASE2P10153 161 aaKnown RBP15.2■□□□□ 0.02
TRAF4-203ENST00000394925 SUB1P53999 127 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAF4-203ENST00000394925 RAB40CQ96S21 281 aa15.2■□□□□ 0.02
TRAF4-203ENST00000394925 NDUFAF3Q9BU61 184 aa15.2■□□□□ 0.02
TRAF4-203ENST00000394925 FNDC4Q9H6D8 234 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-203ENST00000394925 ABCA13Q86UQ4 5058 aa15.2■□□□□ 0.02
TRAF4-203ENST00000394925 A0A0B4J293 547 aa15.19■□□□□ 0.02
TRAF4-203ENST00000394925 RPS19P39019 145 aaKnown RBP15.19■□□□□ 0.02
TRAF4-203ENST00000394925 OPRK1P41145 380 aa15.19■□□□□ 0.02
TRAF4-203ENST00000394925 UCP3P55916 312 aa15.19■□□□□ 0.02
TRAF4-203ENST00000394925 DHRS2Q13268 280 aa15.19■□□□□ 0.02
TRAF4-203ENST00000394925 PSMG4Q5JS54 123 aa15.19■□□□□ 0.02
TRAF4-203ENST00000394925 GPX8Q8TED1 209 aa15.19■□□□□ 0.02
TRAF4-203ENST00000394925 INS-IGF2F8WCM5 200 aa15.18■□□□□ 0.02
TRAF4-203ENST00000394925 ETV6P41212 452 aa15.18■□□□□ 0.02
TRAF4-203ENST00000394925 HOXA1P49639 335 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-203ENST00000394925 TIGITQ495A1 244 aa15.18■□□□□ 0.02
TRAF4-203ENST00000394925 OR4X1Q8NH49 305 aa15.18■□□□□ 0.02
TRAF4-203ENST00000394925 PDCD10Q9BUL8 212 aa15.18■□□□□ 0.02
TRAF4-203ENST00000394925 SCGB2A1O75556 95 aa15.17■□□□□ 0.02
TRAF4-203ENST00000394925 AKR1C2P52895 323 aa15.17■□□□□ 0.02
TRAF4-203ENST00000394925 KCTD21Q4G0X4 260 aa15.17■□□□□ 0.02
TRAF4-203ENST00000394925 Q9H521 79 aa15.17■□□□□ 0.02
TRAF4-203ENST00000394925 XCL2Q9UBD3 114 aa15.17■□□□□ 0.02
TRAF4-203ENST00000394925 HELTA6NFD8 242 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 IGKV1-17P01599 117 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 P0C879 139 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 PGAM2P15259 253 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 PI3P19957 117 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 NPY1RP25929 384 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 EIF2B2P49770 351 aaKnown RBP15.16■□□□□ 0.02
TRAF4-203ENST00000394925 TP53RKQ96S44 253 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 ENY2Q9NPA8 101 aa15.16■□□□□ 0.02
TRAF4-203ENST00000394925 RPL5P46777 297 aaKnown RBP15.15■□□□□ 0.02
TRAF4-203ENST00000394925 LSM3P62310 102 aaKnown RBP15.15■□□□□ 0.02
TRAF4-203ENST00000394925 LGALS9BQ3B8N2 356 aa15.15■□□□□ 0.02
TRAF4-203ENST00000394925 SNX29P2Q8IUI4 249 aa15.15■□□□□ 0.02
TRAF4-203ENST00000394925 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
TRAF4-203ENST00000394925 U3KQE9 123 aa15.15■□□□□ 0.02
TRAF4-203ENST00000394925 M0QYG6 137 aa15.14■□□□□ 0.01
TRAF4-203ENST00000394925 RCVRNP35243 200 aa15.14■□□□□ 0.01
TRAF4-203ENST00000394925 RND3P61587 244 aa15.14■□□□□ 0.01
TRAF4-203ENST00000394925 NUTF2P61970 127 aaKnown RBP15.14■□□□□ 0.01
TRAF4-203ENST00000394925 C16orf54Q6UWD8 224 aa15.14■□□□□ 0.01
TRAF4-203ENST00000394925 GLMPQ8WWB7 406 aa15.14■□□□□ 0.01
TRAF4-203ENST00000394925 SCPEP1Q9HB40 452 aa15.14■□□□□ 0.01
TRAF4-203ENST00000394925 IGLV2-18A0A075B6J9 118 aa15.13■□□□□ 0.01
TRAF4-203ENST00000394925 TRAV30A0A087WSZ9 112 aa15.13■□□□□ 0.01
TRAF4-203ENST00000394925 ATG12O94817 140 aa15.13■□□□□ 0.01
TRAF4-203ENST00000394925 IFNA10P01566 189 aa15.13■□□□□ 0.01
TRAF4-203ENST00000394925 HNRNPCP07910 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRAF4-203ENST00000394925 AP2S1P53680 142 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-203ENST00000394925 PIGPP57054 158 aa15.13■□□□□ 0.01
TRAF4-203ENST00000394925 COMMD3Q9UBI1 195 aa15.13■□□□□ 0.01
TRAF4-203ENST00000394925 SMIM31A0A1B0GVY4 71 aa15.12■□□□□ 0.01
TRAF4-203ENST00000394925 SNRPD3P62318 126 aaKnown RBP15.12■□□□□ 0.01
TRAF4-203ENST00000394925 TRIM16LQ309B1 348 aa15.12■□□□□ 0.01
TRAF4-203ENST00000394925 UBE2DNLQ8IWF7 75 aa15.12■□□□□ 0.01
TRAF4-203ENST00000394925 Q8WTZ3 238 aa15.12■□□□□ 0.01
TRAF4-203ENST00000394925 ZNF486Q96H40 463 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-203ENST00000394925 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 C3orf85A0A1B0GTC6 90 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 FAM90A26D6RGX4 464 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 H3BMM0 161 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms