RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 C9JCJ5 164 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 IGKV1-39P01597 117 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 IGKV1D-39P04432 117 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 KIR2DL2P43627 348 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-201ENST00000261646 GAGE1Q13065 139 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 WFDC3Q8IUB2 231 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 GPR82Q96P67 336 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 SCNM1Q9BWG6 230 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 RPL7P18124 248 aaKnown RBP13.48□□□□□ -0.25
SREBF1-201ENST00000261646 ANOS1P23352 680 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 CD40P25942 277 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 SLC25A10Q9UBX3 287 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-201ENST00000261646 ZFHX2Q9C0A1 2572 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-201ENST00000261646 COL4A3Q01955 1670 aa13.48□□□□□ -0.25
SREBF1-201ENST00000261646 LOC107984156A0A0G2JMH3 177 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 ARL17AQ8IVW1 177 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 RAB1CQ92928 201 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 CHODLQ9H9P2 273 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 IGHV1-69-2A0A0G2JMI3 117 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 OR2T8A6NH00 312 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 H3BVH4 76 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 TPTE2P1Q5T6R2 138 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 MCRIP2Q9BUT9 160 aaKnown RBP13.47□□□□□ -0.25
SREBF1-201ENST00000261646 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 A0A1B0GUT8 65 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 TDRG1Q3Y452 100 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 TSKUQ8WUA8 353 aa13.47□□□□□ -0.25
SREBF1-201ENST00000261646 SMIM13P0DJ93 91 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 Q0VG73 95 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 IDI2-AS1Q9NZ38 188 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-201ENST00000261646 CHD7Q9P2D1 2997 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 A0A087X0K7 114 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 FOXI3A8MTJ6 420 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-201ENST00000261646 PRRG2O14669 202 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 Q6ZVH6 145 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 OR2K2Q8NGT1 345 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 RALYQ9UKM9 306 aaKnown RBP13.46□□□□□ -0.25
SREBF1-201ENST00000261646 CACNA1BQ00975 2339 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 LINC00473A8K010 186 aa13.46□□□□□ -0.25
SREBF1-201ENST00000261646 RBPMS2Q6ZRY4 209 aaKnown RBP13.46□□□□□ -0.25
SREBF1-201ENST00000261646 TRAV3A0A0B4J244 114 aa13.46□□□□□ -0.26
SREBF1-201ENST00000261646 NUPR1O60356 82 aa13.46□□□□□ -0.26
SREBF1-201ENST00000261646 NUDT10Q8NFP7 164 aa13.46□□□□□ -0.26
SREBF1-201ENST00000261646 HIST1H4GQ99525 98 aa13.46□□□□□ -0.26
SREBF1-201ENST00000261646 NOTCH3Q9UM47 2321 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 M0QZ24 198 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 YPEL3P61236 119 aaPredicted RBP13.45□□□□□ -0.26
SREBF1-201ENST00000261646 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 C17orf82Q86X59 251 aaPredicted RBP13.45□□□□□ -0.26
SREBF1-201ENST00000261646 PYGO2Q9BRQ0 406 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 C15orf61A6NNL5 157 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 LYRM7Q5U5X0 104 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 MBNL2Q5VZF2 373 aaKnown RBP13.45□□□□□ -0.26
SREBF1-201ENST00000261646 GGNQ86UU5 652 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 OR52E5Q8NH55 327 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 HIST1H1AQ02539 215 aaPredicted RBP13.45□□□□□ -0.26
SREBF1-201ENST00000261646 MORN2Q502X0 79 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 ZNF714Q96N38 554 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 ONECUT1Q9UBC0 465 aa13.45□□□□□ -0.26
SREBF1-201ENST00000261646 TRAV8-6A0A0B4J262 113 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 KIR2DL5BA0A0G2JN68 375 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 KIR2DL5BA0A0G2JPC4 375 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 J3KRW8 73 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 SAMD13Q5VXD3 122 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 KIR2DL5AQ8N109 375 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 DEFB124Q8NES8 71 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 J3QW42 95 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 TDGF1P13385 188 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 AREGP15514 252 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 PSMB2P49721 201 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 JKAMPQ9P055 326 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 PRR14LQ5THK1 2151 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 A0A1B0GV72 72 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 GAGE12BA1L429 117 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 ATP5IP56385 69 aaPredicted RBP13.44□□□□□ -0.26
SREBF1-201ENST00000261646 PCNX3Q9H6A9 2034 aa13.44□□□□□ -0.26
SREBF1-201ENST00000261646 FOXL2NBQ6ZUU3 175 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 OR4C13Q8NGP0 309 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 MRPS16Q9Y3D3 137 aaKnown RBP13.43□□□□□ -0.26
SREBF1-201ENST00000261646 PCDH15Q96QU1 1955 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 LOC102723996A0A087X1L8 192 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 TRBV6-6A0A0A6YYG2 114 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 F2Z2F3 143 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 FCGR2BP31994 310 aaPredicted RBP13.43□□□□□ -0.26
SREBF1-201ENST00000261646 LINC00479Q96M42 142 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 SMIM17P0DL12 118 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 TEX43Q6ZNM6 134 aa13.43□□□□□ -0.26
SREBF1-201ENST00000261646 PRRC2CQ9Y520 2896 aaKnown RBP13.43□□□□□ -0.26
SREBF1-201ENST00000261646 C21orf140B9A014 251 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 PRELID3AQ96N28 172 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 DOPEY2Q9Y3R5 2298 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 PRB4P10163 310 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-201ENST00000261646 Q6P435 159 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 GFRA3O60609 400 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 ZNF138P52744 262 aa13.42□□□□□ -0.26
SREBF1-201ENST00000261646 C2orf83Q53S99 150 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms