RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 C22orf34Q6ZV56 151 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 OR4B1Q8NGF8 309 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 ATG101Q9BSB4 218 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 SERTAD4Q9NUC0 356 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 FBXL7Q9UJT9 491 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 A0A1W2PS18 150 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 FOSL1P15407 271 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 ZNF124Q15973 351 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 THAP8Q8NA92 274 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 ZNF596Q8TC21 504 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 PAXXQ9BUH6 204 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 PAM16Q9Y3D7 125 aa10.77□□□□□ -0.69
SRP54-201ENST00000216774 C17orf100A8MU93 164 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 ZNF253O75346 499 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 APCSP02743 223 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 SRIP30626 198 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 AMTP48728 403 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 SLC35B1P78383 322 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 WT1-ASQ06250 92 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 TMEM200BQ69YZ2 307 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
SRP54-201ENST00000216774 ZNF329Q86UD4 541 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 LINC00311Q8N616 119 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 OR10X1Q8NGY0 326 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 TMEM186Q96B77 213 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 MBD6Q96DN6 1003 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 NRN1Q9NPD7 142 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 ZNF331Q9NQX6 463 aaPredicted RBP10.76□□□□□ -0.69
SRP54-201ENST00000216774 TNCP24821 2201 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 CFAP47Q6ZTR5 3102 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 DYSFO75923 2080 aa10.76□□□□□ -0.69
SRP54-201ENST00000216774 E7EUB6 86 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 PEX7O00628 323 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 ZNF324O75467 553 aaPredicted RBP10.75□□□□□ -0.69
SRP54-201ENST00000216774 CCL3L1P16619 93 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 KRTDAPP60985 99 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 KIAA1644Q3SXP7 199 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 Q8N976 141 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 FAM57AQ8TBR7 257 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 RCHY1Q96PM5 261 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 FAM103A1Q9BTL3 118 aaKnown RBP10.75□□□□□ -0.69
SRP54-201ENST00000216774 CHRDL1Q9BU40 450 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 FNDC4Q9H6D8 234 aaPredicted RBP10.75□□□□□ -0.69
SRP54-201ENST00000216774 CGB1A6NKQ9 187 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 DIRC3C9JPN6 131 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
SRP54-201ENST00000216774 PATE2Q6UY27 113 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 NPIPB3Q92617 1050 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 GRAMD2BQ96HH9 432 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 MRPL27Q9P0M9 148 aaKnown RBP10.75□□□□□ -0.69
SRP54-201ENST00000216774 WASHC3Q9Y3C0 194 aa10.75□□□□□ -0.69
SRP54-201ENST00000216774 IGKV1D-37A0A075B6S9 117 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 FSTL3O95633 263 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 IGLV2-23P01705 113 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 PYYP10082 97 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 REG1BP48304 166 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 SSBP2P81877 361 aaPredicted RBP10.74□□□□□ -0.69
SRP54-201ENST00000216774 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 STXBP6Q8NFX7 210 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 PPIAL4EA0A075B759 164 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 PPIAL4DF5H284 164 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 PPIAL4FP0DN26 164 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 ZNF137PP52743 207 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 NHLRC2Q8NBF2 726 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 ST6GALNAC6Q969X2 333 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 SMIM12Q96EX1 92 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 PPIAL4AQ9Y536 164 aa10.74□□□□□ -0.69
SRP54-201ENST00000216774 YLPM1P49750 1951 aaKnown RBP10.73□□□□□ -0.69
SRP54-201ENST00000216774 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 FCN3O75636 299 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
SRP54-201ENST00000216774 MYCNOSP40205 109 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 TBR1Q16650 682 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 VMA21Q3ZAQ7 101 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 C19orf35Q6ZS72 473 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 FAM168AQ92567 244 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 SAP30LQ9HAJ7 183 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 PMCHP20382 165 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 MC5RP33032 325 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 CTRLP40313 264 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 PRRX1P54821 245 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 SLAQ13239 276 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 LRRC10Q5BKY1 277 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 ETFRF1Q6IPR1 90 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 ASCL5Q7RTU5 278 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 ZCCHC24Q8N2G6 241 aaKnown RBP10.73□□□□□ -0.69
SRP54-201ENST00000216774 RBMXL3Q8N7X1 1067 aaKnown RBP10.73□□□□□ -0.69
SRP54-201ENST00000216774 TMEM68Q96MH6 324 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
SRP54-201ENST00000216774 ZFHX4Q86UP3 3567 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 SVILO95425 2214 aa10.72□□□□□ -0.69
SRP54-201ENST00000216774 TNFRSF13BO14836 293 aaPredicted RBP10.72□□□□□ -0.69
SRP54-201ENST00000216774 NDUFB3O43676 98 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms