RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SSTP61278 116 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 DMRTA1Q5VZB9 504 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 C8orf46Q8TAG6 207 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 MGST2Q99735 147 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 C9JQL5 133 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 E7EQL1 145 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 IGHV3-7P01780 117 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 THBDP07204 575 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 OR10D4PQ8NGN7 298 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 TXN2Q99757 166 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PCNX2A6NKB5 2137 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 TRGC1P0CF51 173 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PDLIM4P50479 330 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 FAM201AQ5SY85 155 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 SMIM15Q7Z3B0 74 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 ATP5L2Q7Z4Y8 100 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 LINC01551Q86U37 167 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 SPTBN1Q01082 2364 aaKnown RBP3.72□□□□□ -1.81
SCN1A-210ENST00000635776 TGIF2-C20orf24A0A0A6YYL0 155 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 OR10J4P0C629 311 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 RD3LP0DJH9 198 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 CCL3L1P16619 93 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 PSMG4Q5JS54 123 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 TEX38Q6PEX7 206 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 VKORC1L1Q8N0U8 176 aa3.72□□□□□ -1.81
SCN1A-210ENST00000635776 SAPCD1Q5SSQ6 148 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 SIGLECL1Q8N7X8 197 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 THAP8Q8NA92 274 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 SRSF12Q8WXF0 261 aaKnown RBP3.71□□□□□ -1.81
SCN1A-210ENST00000635776 EAF1Q96JC9 268 aaPredicted RBP3.71□□□□□ -1.81
SCN1A-210ENST00000635776 NAT8BQ9UHF3 227 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 BUB1B-PAK6H3BSN5 160 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 NDUFS8O00217 210 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF726P1Q15940 193 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 SAMD13Q5VXD3 122 aa3.71□□□□□ -1.81
SCN1A-210ENST00000635776 F11RQ9Y624 299 aaKnown RBP3.71□□□□□ -1.81
SCN1A-210ENST00000635776 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF705FA8MVS1 300 aaPredicted RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 LINC00587B1AMM8 73 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 M0QZK8 103 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 P01737 135 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF705DP0CH99 300 aaPredicted RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF705BP0CI00 300 aaPredicted RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF134P52741 427 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 DSCR9P59020 149 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 GAMTQ14353 236 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 NECAP1Q8NC96 275 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 OR1B1Q8NGR6 318 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 IGHV1-3A0A0C4DH29 117 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 SLC31A2O15432 143 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ORM2P19652 201 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 MDKP21741 143 aaPredicted RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 REG1BP48304 166 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ARSJQ5FYB0 599 aaPredicted RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM37Q8WXS4 190 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 LEAP2Q969E1 77 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 OTORQ9NRC9 128 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 PFN1P07737 140 aaKnown RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 TPTE2P1Q5T6R2 138 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ATP6V0BQ99437 205 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ATG101Q9BSB4 218 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 GNB1LQ9BYB4 327 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 BMPR1BO00238 502 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 CHEK1O14757 476 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 AMY1AP04745 511 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 FABP4P15090 132 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM11P17152 192 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 RIGQ13278 110 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 Q56UQ5 140 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF600Q6ZNG1 722 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 FAM231DQ6ZW35 169 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZCCHC24Q8N2G6 241 aaKnown RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM116Q8NCL8 245 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 ZFP30Q9Y2G7 519 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 SHISA9B4DS77 424 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 EIF3GO75821 320 aaKnown RBP eCLIP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 NBEAP1P0C6P0 100 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 PLP1P60201 277 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 PKIAP61925 76 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 PLA2G2EQ9NZK7 142 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 CT83Q5H943 113 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 PHF3Q92576 2039 aaKnown RBP3.71□□□□□ -1.82
SCN1A-210ENST00000635776 CEP192Q8TEP8 1941 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 PKDREJQ9NTG1 2253 aa3.71□□□□□ -1.82
SCN1A-210ENST00000635776 C22orf46C9J442 243 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HSBP1L1C9JCN9 74 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 HSBP1O75506 76 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 LYZP61626 148 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 SCRT1Q9BWW7 348 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 PEX7O00628 323 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 CRYBB3P26998 211 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 ATP5G3P48201 142 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 C4orf17Q53FE4 359 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 ODF3L1Q8IXM7 274 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 OR5R1Q8NH85 324 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 LINC01560Q8TB33 94 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 PIMREGQ9BSJ6 248 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF355PQ9NSJ1 428 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 SIGLEC9Q9Y336 463 aa3.7□□□□□ -1.82
SCN1A-210ENST00000635776 SCGB1D1O95968 90 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms