RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PPP1R1AQ13522 171 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 CD300EQ496F6 205 aaPredicted RBP10.94□□□□□ -0.66
CMTM3-215ENST00000568477 FAM106AQ4KMX7 169 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 ZNF585BQ52M93 769 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 ADAMTSL5Q6ZMM2 481 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 GPHB5Q86YW7 130 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 OR10W1Q8NGF6 305 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 MITD1Q8WV92 249 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 HINT2Q9BX68 163 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 THYN1Q9P016 225 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
CMTM3-215ENST00000568477 C14orf166Q9Y224 244 aaKnown RBP10.94□□□□□ -0.66
CMTM3-215ENST00000568477 HUWE1Q7Z6Z7 4374 aaKnown RBP10.93□□□□□ -0.66
CMTM3-215ENST00000568477 TEX50A0A1B0GTY4 177 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 OR13C7P0DN81 318 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 FOLR2P14207 255 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 PGAM2P15259 253 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 AKR1C4P17516 323 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 G6PCP35575 357 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 TBC1D26Q86UD7 250 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 SLC38A6Q8IZM9 456 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 LSM10Q969L4 123 aaKnown RBP10.93□□□□□ -0.66
CMTM3-215ENST00000568477 TMEM230Q96A57 120 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 ZNF486Q96H40 463 aaPredicted RBP10.93□□□□□ -0.66
CMTM3-215ENST00000568477 TUBA4BQ9H853 241 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 FAM212BQ9NTI7 297 aaPredicted RBP10.93□□□□□ -0.66
CMTM3-215ENST00000568477 TECRQ9NZ01 308 aaKnown RBP10.93□□□□□ -0.66
CMTM3-215ENST00000568477 PRNDQ9UKY0 176 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 NSG2Q9Y328 171 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 OR51B2Q9Y5P1 312 aa10.93□□□□□ -0.66
CMTM3-215ENST00000568477 KMT2CQ8NEZ4 4911 aaKnown RBP10.92□□□□□ -0.66
CMTM3-215ENST00000568477 ZNF320A2RRD8 509 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 SFT2D2O95562 160 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 CLEC3BP05452 202 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 GPR183P32249 361 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 NKX2-5P52952 324 aaPredicted RBP10.92□□□□□ -0.66
CMTM3-215ENST00000568477 WT1-ASQ06250 92 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 DEFB114Q30KQ6 69 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 TM2D3Q9BRN9 247 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 FKBP11Q9NYL4 201 aa10.92□□□□□ -0.66
CMTM3-215ENST00000568477 A8MWP6 167 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 C3orf84H3BNL1 204 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 GOSR2O14653 212 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 SERPINE2P07093 398 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 EDN2P20800 178 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 VAMP1P23763 118 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 CD81P60033 236 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 GUCA2BQ16661 112 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 SLC25A24Q6NUK1 477 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 UXS1Q8NBZ7 420 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 OR2T35Q8NGX2 323 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 OR5B3Q8NH48 314 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 VN1R17PQ8TDU5 208 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 ZC4H2Q9NQZ6 224 aa10.91□□□□□ -0.66
CMTM3-215ENST00000568477 F11RQ9Y624 299 aaKnown RBP10.91□□□□□ -0.66
CMTM3-215ENST00000568477 TMEM213A2RRL7 107 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 DBX1A6NMT0 343 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 ZNF785A8K8V0 405 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 CBLN1P23435 193 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 SUPT4H1P63272 117 aaKnown RBP10.9□□□□□ -0.66
CMTM3-215ENST00000568477 COQ8AQ8NI60 647 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 CACNG8Q8WXS5 425 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 TMEM56Q96MV1 263 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 TMEM14BQ9NUH8 114 aa10.9□□□□□ -0.66
CMTM3-215ENST00000568477 CRYM-AS1A6NIL9 109 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 SMLR1H3BR10 107 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 TGOLN2O43493 480 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 PI3P19957 117 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 H2BFSP57053 126 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 HAGHQ16775 308 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 H2BFWTQ7Z2G1 175 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 ZBTB8BQ8NAP8 495 aaPredicted RBP10.89□□□□□ -0.67
CMTM3-215ENST00000568477 OR1L6Q8NGR2 347 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 OR4A16Q8NH70 328 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 MUC7Q8TAX7 377 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 SEC22AQ96IW7 307 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 SPATA25Q9BR10 227 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 PLEKHA3Q9HB20 300 aa10.89□□□□□ -0.67
CMTM3-215ENST00000568477 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 MFAP2P55001 183 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 RND3P61587 244 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 TM4SF20Q53R12 229 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 UNQ9165/PRO28630Q6UXU0 137 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 CCDC71LQ8N9Z2 235 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 WDR89Q96FK6 387 aaPredicted RBP10.88□□□□□ -0.67
CMTM3-215ENST00000568477 GALNT14Q96FL9 552 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 KCNIP3Q9Y2W7 256 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 UFC1Q9Y3C8 167 aa10.88□□□□□ -0.67
CMTM3-215ENST00000568477 IGHV3-21A0A0B4J1V1 117 aa10.87□□□□□ -0.67
CMTM3-215ENST00000568477 TEX13DA0A0J9YY54 714 aaPredicted RBP10.87□□□□□ -0.67
CMTM3-215ENST00000568477 OR2T8A6NH00 312 aa10.87□□□□□ -0.67
CMTM3-215ENST00000568477 G3V3Q6 166 aa10.87□□□□□ -0.67
CMTM3-215ENST00000568477 SIX6O95475 246 aa10.87□□□□□ -0.67
CMTM3-215ENST00000568477 CD7P09564 240 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms