RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 C2orf83Q53S99 150 aa10.29□□□□□ -0.76
CDH1-204ENST00000562118 SPINK9Q5DT21 86 aa10.29□□□□□ -0.76
CDH1-204ENST00000562118 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
CDH1-204ENST00000562118 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
CDH1-204ENST00000562118 MPTX1A8MV57 137 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 CORTO00230 105 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 PRAF2O60831 178 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 PTTG1O95997 202 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 CD33P20138 364 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 HTR2BP41595 481 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 HOXA1P49639 335 aaPredicted RBP10.28□□□□□ -0.76
CDH1-204ENST00000562118 SLURP1P55000 103 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 ATP5IP56385 69 aaPredicted RBP10.28□□□□□ -0.76
CDH1-204ENST00000562118 ID3Q02535 119 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 EGFEM1PQ0D2K5 195 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 SCARB1Q8WTV0 552 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 SEC22CQ9BRL7 303 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 MCRIP2Q9BUT9 160 aaKnown RBP10.28□□□□□ -0.76
CDH1-204ENST00000562118 RBKSQ9H477 322 aa10.28□□□□□ -0.76
CDH1-204ENST00000562118 SNRPGP15A8MWD9 76 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 LGALS9O00182 355 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 HOXB5P09067 269 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 IL15RAQ13261 267 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 SLC25A24Q6NUK1 477 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 ACSM6Q6P461 480 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 PLET1Q6UQ28 207 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 IL34Q6ZMJ4 242 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 DTD1Q8TEA8 209 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 DPF1Q92782 380 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 TXN2Q99757 166 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 ZNF436Q9C0F3 470 aaPredicted RBP10.27□□□□□ -0.77
CDH1-204ENST00000562118 SIGLEC8Q9NYZ4 499 aa10.27□□□□□ -0.77
CDH1-204ENST00000562118 C7orf66A4D0T2 115 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 A8MWP6 167 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 G3V4G9 280 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 LY86O95711 162 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 IGLL1P15814 213 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 SUB1P53999 127 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH1-204ENST00000562118 C11orf87Q6NUJ2 197 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 REC114Q7Z4M0 266 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 C1QL4Q86Z23 238 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 SLC24A4Q8NFF2 622 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 OR1S1Q8NH92 325 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
CDH1-204ENST00000562118 BSCL2Q96G97 398 aaPredicted RBP10.26□□□□□ -0.77
CDH1-204ENST00000562118 OR10C1Q96KK4 312 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 GPR61Q9BZJ8 451 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
CDH1-204ENST00000562118 C21orf62Q9NYP8 219 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 U3KQ87 197 aa10.26□□□□□ -0.77
CDH1-204ENST00000562118 ANKRD34BA5PLL1 514 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 PPP5D1E7EU14 171 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 INMT-MINDY4F8WBC2 141 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 OVOL1O14753 267 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 TGOLN2O43493 480 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 GGCTO75223 188 aaKnown RBP10.25□□□□□ -0.77
CDH1-204ENST00000562118 MT-CO2P00403 227 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 IFNA21P01568 189 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 SPNP16150 400 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 ADMP35318 185 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 SNCAP37840 140 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 INSL3P51460 131 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 OXLD1Q5BKU9 147 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 SPSB3Q6PJ21 355 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 C12orf45Q8N5I9 185 aaPredicted RBP10.25□□□□□ -0.77
CDH1-204ENST00000562118 ZBTB8BQ8NAP8 495 aaPredicted RBP10.25□□□□□ -0.77
CDH1-204ENST00000562118 ENY2Q9NPA8 101 aa10.25□□□□□ -0.77
CDH1-204ENST00000562118 C15orf62A8K5M9 175 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 CEBPZOSA8MTT3 80 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 PRSS46E5RG02 174 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 SYNGR2O43760 224 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 MED6O75586 246 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 IGHV3-23P01764 117 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 CLEC3BP05452 202 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 CTSGP08311 255 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 NPY1RP25929 384 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 ARL3P36405 182 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 CLEC19AQ6UXS0 136 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 TMEM116Q8NCL8 245 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 HIPK2Q9H2X6 1198 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 C11orf1Q9H5F2 150 aa10.24□□□□□ -0.77
CDH1-204ENST00000562118 HEYLQ9NQ87 328 aaPredicted RBP10.24□□□□□ -0.77
CDH1-204ENST00000562118 GAR1Q9NY12 217 aaKnown RBP10.24□□□□□ -0.77
CDH1-204ENST00000562118 RCL1Q9Y2P8 373 aaKnown RBP10.24□□□□□ -0.77
CDH1-204ENST00000562118 NXPH3O95157 252 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 GPR183P32249 361 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 RPEL1Q2QD12 228 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 IAH1Q2TAA2 248 aaPredicted RBP10.23□□□□□ -0.77
CDH1-204ENST00000562118 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 NOXA1Q86UR1 476 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 OR9G4Q8NGQ1 327 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 OR4X1Q8NH49 305 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 CIB3Q96Q77 187 aaPredicted RBP10.23□□□□□ -0.77
CDH1-204ENST00000562118 CHRDL1Q9BU40 450 aa10.23□□□□□ -0.77
CDH1-204ENST00000562118 GPN1Q9HCN4 374 aaPredicted RBP10.23□□□□□ -0.77
CDH1-204ENST00000562118 MRPL36Q9P0J6 103 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms