RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 PQLC2Q6ZP29 291 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 MRPL41Q8IXM3 137 aaKnown RBP8.13□□□□□ -1.11
LRRC28-216ENST00000559819 GBGT1Q8N5D6 347 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 OSR1Q8TAX0 266 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-216ENST00000559819 FKBP11Q9NYL4 201 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 TECRQ9NZ01 308 aaKnown RBP8.13□□□□□ -1.11
LRRC28-216ENST00000559819 SPTBN2O15020 2390 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 PKDREJQ9NTG1 2253 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 IGHV3-72A0A0B4J1Y9 119 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 NDUFB3O43676 98 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 SPINK4O60575 86 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 OR5G3P0C626 314 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 DDTP30046 118 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 WT1-ASQ06250 92 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM177Q53S58 311 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 SLC35E1Q96K37 410 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
LRRC28-216ENST00000559819 MRPL36Q9P0J6 103 aaKnown RBP8.13□□□□□ -1.11
LRRC28-216ENST00000559819 PCNX1Q96RV3 2341 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 PIEZO2Q9H5I5 2752 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 HELTA6NFD8 242 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 C9JCJ5 164 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 AREGP15514 252 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 LOXP28300 417 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 GNG4P50150 75 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 ERVFC1-1P60608 527 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 SUMO1P63165 101 aaKnown RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 FXYD3Q14802 87 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 RUSC1-AS1Q66K80 236 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 C19orf35Q6ZS72 473 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 FNDC4Q9H6D8 234 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 ZNF430Q9H8G1 570 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM167BQ9NRX6 74 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 V9GYV3 84 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 A0A087X0M5 115 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 A0A1B0GX30 115 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 E7EQL1 145 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 TSTD3H0UI37 97 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 IGLV2-23P01705 113 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 BTF3P20290 206 aaKnown RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 ERHP84090 104 aaKnown RBP8.12□□□□□ -1.11
LRRC28-216ENST00000559819 LHFPL4Q7Z7J7 247 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 OR1L6Q8NGR2 347 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 SLC25A2Q9BXI2 301 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 TP53TG3Q9ULZ0 132 aa8.12□□□□□ -1.11
LRRC28-216ENST00000559819 F2Z2F3 143 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 GATCO43716 136 aaKnown RBP8.11□□□□□ -1.11
LRRC28-216ENST00000559819 SLC25A17O43808 307 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 APELAP0DMC3 54 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 PYYP10082 97 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 LGALS4P56470 323 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 YPEL3P61236 119 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-216ENST00000559819 SLC35B1P78383 322 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 SSX2Q16385 188 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 LRRC10Q5BKY1 277 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 CUL9Q8IWT3 2517 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 OR8I2Q8N0Y5 310 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 NHLRC2Q8NBF2 726 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM167AQ8TBQ9 72 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 RNASE6Q93091 150 aaKnown RBP8.11□□□□□ -1.11
LRRC28-216ENST00000559819 FAM167A-AS1Q96KT0 104 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
LRRC28-216ENST00000559819 DYNLRB1Q9NP97 96 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 JKAMPQ9P055 326 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 DCHS1Q96JQ0 3298 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 SHISA9B4DS77 424 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 LYNX1G3V0Z9 82 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 ENSAO43768 121 aaKnown RBP8.11□□□□□ -1.11
LRRC28-216ENST00000559819 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 LYNX1P0DP58 116 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 IER3P46695 156 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 DLX6P56179 175 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 TCL1AP56279 114 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 LURAP1LQ8IV03 231 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 DMRTC2Q8IXT2 367 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-216ENST00000559819 MMD2Q8IY49 270 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 SVIPQ8NHG7 77 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 LINC00479Q96M42 142 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 ACACAQ13085 2346 aa8.11□□□□□ -1.11
LRRC28-216ENST00000559819 PSMB11A5LHX3 300 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 PLAUP00749 431 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 GCGP01275 180 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 CD33P20138 364 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 USF1P22415 310 aaPredicted RBP8.1□□□□□ -1.11
LRRC28-216ENST00000559819 RPEL1Q2QD12 228 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 OR5AU1Q8NGC0 362 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 OR4C13Q8NGP0 309 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 ST6GALNAC6Q969X2 333 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 CHODLQ9H9P2 273 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 APC2O95996 2303 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 ADGRG4Q8IZF6 3080 aa8.1□□□□□ -1.11
LRRC28-216ENST00000559819 IGHV3-21A0A0B4J1V1 117 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms