RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FAM223BA6NKX1 122 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 C15orf62A8K5M9 175 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 E7EUB6 86 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 ELANEP08246 267 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 HKR1P10072 659 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 AREGP15514 252 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 DLK1P80370 383 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 NDPQ00604 133 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 EWSR1Q01844 656 aaKnown RBP eCLIP9.76□□□□□ -0.85
TPM1-209ENST00000558072 Q5BKY6 102 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 TEX38Q6PEX7 206 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 CENPVQ7Z7K6 275 aaPredicted RBP9.76□□□□□ -0.85
TPM1-209ENST00000558072 PRIMA1Q86XR5 153 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 FAM223AQ8IWN6 122 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 LILRB2Q8N423 598 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 KCNRGQ8N5I3 272 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 NECAP1Q8NC96 275 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 USMG5Q96IX5 58 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 ZNF355PQ9NSJ1 428 aa9.76□□□□□ -0.85
TPM1-209ENST00000558072 A0A1B0GW64 132 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 PSMB11A5LHX3 300 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 G3V3Q6 166 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 H3BP45 60 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 SMLR1H3BR10 107 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 SOX15O60248 233 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 JTBO76095 146 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 TMEM50AO95807 157 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 IFNA5P01569 189 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 METTL15P1P0C7V9 234 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 OPRK1P41145 380 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
TPM1-209ENST00000558072 RAB31Q13636 194 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 VN1R17PQ8TDU5 208 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 SLC35E1Q96K37 410 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 TXN2Q99757 166 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 MTORP42345 2549 aa9.75□□□□□ -0.85
TPM1-209ENST00000558072 TET2Q6N021 2002 aaPredicted RBP9.74□□□□□ -0.85
TPM1-209ENST00000558072 TRAV30A0A087WSZ9 112 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 IGSF23A1L1A6 192 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 MPDU1O75352 247 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 IGHG4P01861 327 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 FABP1P07148 127 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 PPIFP30405 207 aaKnown RBP9.74□□□□□ -0.85
TPM1-209ENST00000558072 NPBWR1P48145 328 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 CD69Q07108 199 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 SLC38A11Q08AI6 406 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 FOXE3Q13461 319 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 Q6ZS46 218 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 Q6ZSV7 163 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 OR5T1Q8NG75 326 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 OR11H4Q8NGC9 324 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 OR4X2Q8NGF9 303 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 WFDC12Q8WWY7 111 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 MISP3Q96FF7 219 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 OR4C12Q96R67 309 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 ARPC5LQ9BPX5 153 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 ARL6Q9H0F7 186 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 KCNIP2Q9NS61 270 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 UQCC1Q9NVA1 299 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 FBXO7Q9Y3I1 522 aa9.74□□□□□ -0.85
TPM1-209ENST00000558072 PLXNB1O43157 2135 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 MXRA5Q9NR99 2828 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 IGLV11-55A0A075B6I3 123 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 TRBV7-1A0A0A6YYK4 115 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 TRBV9A0A0B4J1U6 114 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 CST7O76096 145 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 REG1AP05451 166 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 FOXL1Q12952 345 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 TMEM95Q3KNT9 176 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 ASPHD1Q5U4P2 390 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 EIF5AL1Q6IS14 154 aaKnown RBP9.73□□□□□ -0.85
TPM1-209ENST00000558072 OR5C1Q8NGR4 320 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 SCGB1C1Q8TD33 95 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 EEF1AKMT3Q96AZ1 226 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 ATP5SQ99766 215 aa9.73□□□□□ -0.85
TPM1-209ENST00000558072 PARD6GQ9BYG4 376 aaPredicted RBP9.73□□□□□ -0.85
TPM1-209ENST00000558072 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 LINC01548A6NM66 108 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 G3V318 75 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 BCL2L11O43521 198 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 TRGV3P03979 118 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 APELAP0DMC3 54 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 PF4V1P10720 104 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
TPM1-209ENST00000558072 MFAP4P55083 255 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 NHLH2Q02577 135 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 HIST2H2BDQ6DRA6 164 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 TMUB2Q71RG4 321 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 SLC16A13Q7RTY0 426 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 TMEM217Q8N7C4 229 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 FBXL7Q9UJT9 491 aa9.72□□□□□ -0.85
TPM1-209ENST00000558072 CLPSL1A2RUU4 121 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 PMS2P5A8MQ11 134 aa9.71□□□□□ -0.86
TPM1-209ENST00000558072 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms