RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 VN1R17PQ8TDU5 208 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 CXorf58Q96LI9 332 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 CITED2Q99967 270 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 ZNF436Q9C0F3 470 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 OR2J3O76001 311 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 RAB11AP62491 216 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 C19orf35Q6ZS72 473 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 LCNL1Q6ZST4 164 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 PPP1R1CQ8WVI7 109 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 ATP6V0BQ99437 205 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 STRAPQ9Y3F4 350 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 L7N2F9 121 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 DEDDO75618 318 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 S100A10P60903 97 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 RAP2BP61225 183 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 VAMP2P63027 116 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 RUNX1Q01196 453 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 KHDC1LQ5JSQ8 128 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 C4orf3Q8WVX3 66 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 PSENENQ9NZ42 101 aa12.77□□□□□ -0.37
SPTLC2-203ENST00000554901 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 NDUFB8O95169 186 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 TMEM50AO95807 157 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 PAX9P55771 341 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 FGL1Q08830 312 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 TMEM170AQ8WVE7 144 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 MISP3Q96FF7 219 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 C11orf1Q9H5F2 150 aa12.76□□□□□ -0.37
SPTLC2-203ENST00000554901 TRBV7-1A0A0A6YYK4 115 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 RPS10-NUDT3A0A1W2PQS6 291 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 E5RGE8 158 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 I3L2K1 104 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 K7EIM0 57 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 MPC2O95563 127 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 SPANXN5Q5MJ07 72 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 ZNF343Q6P1L6 599 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 EEF1AKMT3Q96AZ1 226 aa12.75□□□□□ -0.37
SPTLC2-203ENST00000554901 ADARB2-AS1A8MUL3 147 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 IFNA4P05014 189 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 LGALS1P09382 135 aaKnown RBP12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 OR8U8P0C7N1 319 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 FCGR2BP31994 310 aaPredicted RBP12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 LRRC37A5PQ49AS3 106 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 ETFRF1Q6IPR1 90 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 C11orf87Q6NUJ2 197 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 TMEM14EPQ6UXP3 125 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 CHAC2Q8WUX2 184 aa12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 GAR1Q9NY12 217 aaKnown RBP12.74□□□□□ -0.37
SPTLC2-203ENST00000554901 NUDT19A8MXV4 375 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 I3L521 148 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 MT-CO2P00403 227 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 GPX4P36969 197 aaPredicted RBP12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 OPRK1P41145 380 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 PRSS54Q6PEW0 395 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 SCARB1Q8WTV0 552 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 CACNG8Q8WXS5 425 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 PINX1Q96BK5 328 aaKnown RBP12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 TXN2Q99757 166 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 GNB4Q9HAV0 340 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 C21orf62Q9NYP8 219 aa12.73□□□□□ -0.37
SPTLC2-203ENST00000554901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 MFSD2BA6NFX1 497 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 H3BP45 60 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 SLC25A4P12235 298 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 P2RY1P47900 373 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 ETV3LQ6ZN32 361 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 ZNF502Q8TBZ5 544 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 WDR89Q96FK6 387 aaPredicted RBP12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 H0YIZ8 118 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 IGHV3-11P01762 117 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 LYL1P12980 280 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 CAV2P51636 162 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 MFAP4P55083 255 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 CD69Q07108 199 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 THAP6Q8TBB0 222 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 OR4F4Q96R69 305 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 RNF126Q9BV68 326 aa12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 RANGRFQ9HD47 186 aaPredicted RBP12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 PEF1Q9UBV8 284 aaKnown RBP12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 PAIP2BQ9ULR5 123 aaKnown RBP12.72□□□□□ -0.37
SPTLC2-203ENST00000554901 NPBWR1P48145 328 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 BCAP31P51572 246 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 DEFA5Q01523 94 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 NSUN5P1Q3KNT7 163 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 OR10P1Q8NGE3 313 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 CCDC140Q96MF4 163 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 SLC25A31Q9H0C2 315 aa12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.38
SPTLC2-203ENST00000554901 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms