RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 TBC1D26Q86UD7 250 aa17.64■□□□□ 0.41
LEMD3-203ENST00000541171 OR10C1Q96KK4 312 aa17.64■□□□□ 0.41
LEMD3-203ENST00000541171 NXF2Q9GZY0 626 aaKnown RBP17.64■□□□□ 0.41
LEMD3-203ENST00000541171 FRAS1Q86XX4 4008 aa17.63■□□□□ 0.41
LEMD3-203ENST00000541171 KMT2AQ03164 3969 aa17.63■□□□□ 0.41
LEMD3-203ENST00000541171 RORCP51449 518 aa17.63■□□□□ 0.41
LEMD3-203ENST00000541171 NANOS2P60321 138 aaKnown RBP17.63■□□□□ 0.41
LEMD3-203ENST00000541171 TXN2Q99757 166 aa17.63■□□□□ 0.41
LEMD3-203ENST00000541171 BCL7BQ9BQE9 202 aa17.63■□□□□ 0.41
LEMD3-203ENST00000541171 FBXL17Q9UF56 701 aa17.63■□□□□ 0.41
LEMD3-203ENST00000541171 GNG7O60262 68 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 APOA1P02647 267 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 LPCAT3Q6P1A2 487 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 TCF24Q7RTU0 167 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 OR11H2Q8NH07 326 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 GATAD1Q8WUU5 269 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 AP3S1Q92572 193 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 SEC22AQ96IW7 307 aa17.62■□□□□ 0.41
LEMD3-203ENST00000541171 IGKV1-39P01597 117 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 IGKV1D-39P04432 117 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 EIF4EP06730 217 aaKnown RBP17.61■□□□□ 0.41
LEMD3-203ENST00000541171 RPL5P46777 297 aaKnown RBP17.61■□□□□ 0.41
LEMD3-203ENST00000541171 PAFAH1B2P68402 229 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 SPINK9Q5DT21 86 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 FAM90A2PQ658T7 463 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 C11orf45Q8TAV5 145 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 RAB2BQ8WUD1 216 aa17.61■□□□□ 0.41
LEMD3-203ENST00000541171 PRCDQ00LT1 54 aa17.6■□□□□ 0.41
LEMD3-203ENST00000541171 LGALS9CQ6DKI2 356 aa17.6■□□□□ 0.41
LEMD3-203ENST00000541171 MRGPRFQ96AM1 343 aa17.6■□□□□ 0.41
LEMD3-203ENST00000541171 FAM212BQ9NTI7 297 aaPredicted RBP17.6■□□□□ 0.41
LEMD3-203ENST00000541171 IGHV3-66A0A0C4DH42 116 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 DEFB4AO15263 64 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 CA1P00915 261 aaPredicted RBP17.59■□□□□ 0.41
LEMD3-203ENST00000541171 HSPE1P61604 102 aaKnown RBP17.59■□□□□ 0.41
LEMD3-203ENST00000541171 ERHP84090 104 aaKnown RBP17.59■□□□□ 0.41
LEMD3-203ENST00000541171 RBMS2Q15434 407 aaKnown RBP17.59■□□□□ 0.41
LEMD3-203ENST00000541171 TOMM20LQ6UXN7 152 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 ZNF114Q8NC26 417 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 GPX8Q8TED1 209 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 ST8SIA2Q92186 375 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 GINS3Q9BRX5 216 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 COMMD3Q9UBI1 195 aa17.59■□□□□ 0.41
LEMD3-203ENST00000541171 DNASE2O00115 360 aaPredicted RBP17.58■□□□□ 0.4
LEMD3-203ENST00000541171 ST8SIA3O43173 380 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 APOHP02749 345 aaPredicted RBP17.58■□□□□ 0.4
LEMD3-203ENST00000541171 IFNA4P05014 189 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 ZNF182P17025 639 aaPredicted RBP17.58■□□□□ 0.4
LEMD3-203ENST00000541171 TMBIM6P55061 237 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 RPL11P62913 178 aaKnown RBP17.58■□□□□ 0.4
LEMD3-203ENST00000541171 IZUMO4Q1ZYL8 232 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 LEMD1Q68G75 181 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 MZT2AQ6P582 158 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 SNX29P2Q8IUI4 249 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 CLVS1Q8IUQ0 354 aaPredicted RBP17.58■□□□□ 0.4
LEMD3-203ENST00000541171 LILRB2Q8N423 598 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 MFFQ9GZY8 342 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 DNAH10Q8IVF4 4471 aa17.58■□□□□ 0.4
LEMD3-203ENST00000541171 DEFB131AP59861 70 aa17.57■□□□□ 0.4
LEMD3-203ENST00000541171 DUSP18Q8NEJ0 188 aa17.57■□□□□ 0.4
LEMD3-203ENST00000541171 MS4A6AQ9H2W1 248 aa17.57■□□□□ 0.4
LEMD3-203ENST00000541171 SMIM31A0A1B0GVY4 71 aa17.56■□□□□ 0.4
LEMD3-203ENST00000541171 DFFBO76075 338 aa17.56■□□□□ 0.4
LEMD3-203ENST00000541171 NPBWR1P48145 328 aa17.56■□□□□ 0.4
LEMD3-203ENST00000541171 C11orf68Q9H3H3 251 aaKnown RBP17.56■□□□□ 0.4
LEMD3-203ENST00000541171 PUS1Q9Y606 427 aaKnown RBP eCLIP17.56■□□□□ 0.4
LEMD3-203ENST00000541171 TMEM187Q14656 261 aa17.55■□□□□ 0.4
LEMD3-203ENST00000541171 VSIRQ9H7M9 311 aa17.55■□□□□ 0.4
LEMD3-203ENST00000541171 M0QYG6 137 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 NOL3O60936 208 aaKnown RBP17.54■□□□□ 0.4
LEMD3-203ENST00000541171 CD5P06127 495 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 RCVRNP35243 200 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 SNCAP37840 140 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 UCP3P55916 312 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 SPCS2Q15005 226 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 ZNF600Q6ZNG1 722 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 FAM24BQ8N5W8 94 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 KRTAP17-1Q9BYP8 105 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 SCPEP1Q9HB40 452 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 RABAC1Q9UI14 185 aa17.54■□□□□ 0.4
LEMD3-203ENST00000541171 HPGDSO60760 199 aa17.53■□□□□ 0.4
LEMD3-203ENST00000541171 ELK1P19419 428 aa17.53■□□□□ 0.4
LEMD3-203ENST00000541171 PI3P19957 117 aa17.53■□□□□ 0.4
LEMD3-203ENST00000541171 SLC35G3Q8N808 338 aa17.53■□□□□ 0.4
LEMD3-203ENST00000541171 C2CD4CQ8TF44 421 aa17.53■□□□□ 0.4
LEMD3-203ENST00000541171 ZFAND3Q9H8U3 227 aa17.53■□□□□ 0.4
LEMD3-203ENST00000541171 CCDC59Q9P031 241 aaKnown RBP17.53■□□□□ 0.4
LEMD3-203ENST00000541171 TMEM50AO95807 157 aa17.52■□□□□ 0.4
LEMD3-203ENST00000541171 IFNA17P01571 189 aa17.52■□□□□ 0.4
LEMD3-203ENST00000541171 PGAM2P15259 253 aa17.52■□□□□ 0.4
LEMD3-203ENST00000541171 RNASE12Q5GAN4 147 aaKnown RBP17.52■□□□□ 0.4
LEMD3-203ENST00000541171 A0A1B0GU03 582 aa17.51■□□□□ 0.39
LEMD3-203ENST00000541171 IGKV1-5P01602 117 aa17.51■□□□□ 0.39
LEMD3-203ENST00000541171 STHQ8IWL8 128 aa17.51■□□□□ 0.39
LEMD3-203ENST00000541171 AKR1C2P52895 323 aa17.5■□□□□ 0.39
LEMD3-203ENST00000541171 PRR20EP86478 221 aa17.5■□□□□ 0.39
LEMD3-203ENST00000541171 PRR20CP86479 221 aa17.5■□□□□ 0.39
LEMD3-203ENST00000541171 PRR20DP86480 221 aa17.5■□□□□ 0.39
LEMD3-203ENST00000541171 PRR20BP86481 221 aa17.5■□□□□ 0.39
LEMD3-203ENST00000541171 PRR20AP86496 221 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms