RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, human

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMCC1-208	ENST00000508869	LRP1	Q07954	4544 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	OR5H14	A6NHG9	310 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	C2orf70	A6NJV1	201 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	ZNF670-ZNF695	F2Z2N8	137 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869		H0Y9J4	135 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	LGALS9	O00182	355 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	EI24	O14681	340 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	SULT1B1	O43704	296 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	FADS2	O95864	444 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CA2	P00918	260 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	IGKV1-16	P04430	117 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	DBT	P11182	482 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CTRB1	P17538	263 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	RCC1	P18754	421 aa	Predicted RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	GZMH	P20718	246 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	IL3RA	P26951	378 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	PPP1CC	P36873	323 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	DAP	P51397	102 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CRISP1	P54107	249 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CXCL6	P80162	114 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	PTGES3	Q15185	160 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	PSG5	Q15238	335 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	KLK9	Q2XQG4	91 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	DEFB135	Q30KP9	77 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CNPY1	Q3B7I2	92 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	TP53I3	Q53FA7	332 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	DDI2	Q5TDH0	399 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CTRB2	Q6GPI1	263 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	UNQ5815/PRO19632	Q6UWF5	114 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	TMEM17	Q86X19	198 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	KCNG3	Q8TAE7	436 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	MRPL30	Q8TCC3	161 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CACNG8	Q8WXS5	425 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	GHSR	Q92847	366 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	TBX5	Q99593	518 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	CHRDL1	Q9BU40	450 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	C11orf68	Q9H3H3	251 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	SLC2A8	Q9NY64	477 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	TVP23B	Q9NYZ1	205 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	PEF1	Q9UBV8	284 aa	Known RBP	2.58	□□□□□ -2
TMCC1-208	ENST00000508869	MLX	Q9UH92	298 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	JPT1	Q9UK76	154 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	KLK9	Q9UKQ9	250 aa		2.58	□□□□□ -2
TMCC1-208	ENST00000508869	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	KIR2DL5B	A0A0G2JN68	375 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	KIR2DL5B	A0A0G2JPC4	375 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	FAM240B	A0A1B0GVZ2	78 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	AIP	O00170	330 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	CASQ2	O14958	399 aa	Predicted RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	AIRE	O43918	545 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	YPEL1	O60688	119 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	CCDC22	O60826	627 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	RBBP9	O75884	186 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	OR7C1	O76099	320 aa	Predicted RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	CDRT1	O95170	752 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	C8orf88	P0DMB2	117 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	ANXA8	P13928	327 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	TCTA	P57738	103 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	RPL8	P62917	257 aa	Known RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	FGL1	Q08830	312 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	HMGN3	Q15651	99 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	MPV17L	Q2QL34	196 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	C2orf83	Q53S99	150 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	RPL39P5	Q59GN2	51 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	SYT6	Q5T7P8	510 aa	Predicted RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	TMEM244	Q5VVB8	128 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	LPCAT4	Q643R3	524 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	PVRIG	Q6DKI7	326 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	ZNF880	Q6PDB4	577 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	KCNIP4	Q6PIL6	250 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	LINC00596	Q86U02	117 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	GID4	Q8IVV7	300 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	DEFB107A	Q8IZN7	70 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	KIR2DL5A	Q8N109	375 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869		Q8NAQ8	132 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	OR1L4	Q8NGR5	311 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	KIR2DL5B	Q8NHK3	375 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	TNFAIP8L1	Q8WVP5	186 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	CMTM5	Q96DZ9	223 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	YPEL2	Q96QA6	119 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	RNF5	Q99942	180 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	SULT4A1	Q9BR01	284 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	TAF9B	Q9HBM6	251 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	WARS2	Q9UGM6	360 aa	Known RBP	2.57	□□□□□ -2
TMCC1-208	ENST00000508869	ST3GAL6	Q9Y274	331 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869	FAT3	Q8TDW7	4589 aa		2.57	□□□□□ -2
TMCC1-208	ENST00000508869		A0A0G2JLM5	398 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869		A0A1B0GW64	132 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	PPP5D1	E7EU14	171 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	ITGB1BP1	O14713	200 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	SLC22A1	O15245	554 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	CIB2	O75838	187 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	NAPSA	O96009	420 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	HLA-A	P01891	365 aa	Known RBP	2.56	□□□□□ -2
TMCC1-208	ENST00000508869	CD74	P04233	296 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869		P0C879	139 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	PGAM2	P15259	253 aa		2.56	□□□□□ -2
TMCC1-208	ENST00000508869	IGFBP3	P17936	291 aa	Predicted RBP	2.56	□□□□□ -2
TMCC1-208	ENST00000508869	CBLN1	P23435	193 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms