RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SCRT2Q9NQ03 307 aa13.35□□□□□ -0.27
MCF2L-229ENST00000488765 TRGV10A0A0A0MS01 117 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 A0A1B0GV72 72 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 CHEK1O14757 476 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 IGFBP2P18065 325 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-229ENST00000488765 WDR82Q6UXN9 313 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 TECTAO75443 2155 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 CDIPTO14735 213 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 MLANAQ16655 118 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-229ENST00000488765 ATP6V0BQ99437 205 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 GGTLC3B5MD39 225 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 ATP5G2Q06055 141 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 WIPI1Q5MNZ9 446 aaPredicted RBP13.34□□□□□ -0.27
MCF2L-229ENST00000488765 UFSP1Q6NVU6 142 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 AAED1Q7RTV5 226 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 C19orf24Q9BVV8 132 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 PRRG4Q9BZD6 226 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 NPFFR1Q9GZQ6 430 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 JKAMPQ9P055 326 aa13.34□□□□□ -0.27
MCF2L-229ENST00000488765 TRAV9-1A0A075B6T8 112 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 TRAV5A0A0B4J249 113 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 RPS20P60866 119 aaKnown RBP13.33□□□□□ -0.28
MCF2L-229ENST00000488765 HIST1H1AQ02539 215 aaPredicted RBP13.33□□□□□ -0.28
MCF2L-229ENST00000488765 C2orf91Q6ZV80 131 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 FAM214BQ7L5A3 538 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 SNRNP40Q96DI7 357 aaKnown RBP13.33□□□□□ -0.28
MCF2L-229ENST00000488765 TMEM191AQ9H0A3 160 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 NBASA2RRP1 2371 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 TANC2Q9HCD6 1990 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 IZUMO1RA6ND01 250 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 A6NJY4 79 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 LAMTOR5O43504 91 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 FCGR3BO75015 233 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 NCR2O95944 276 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 HLA-DRB1P01911 266 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 RABAC1Q9UI14 185 aa13.33□□□□□ -0.28
MCF2L-229ENST00000488765 AESQ08117 197 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 GUSBP1Q15486 140 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 GUCD1Q96NT3 240 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 SRSF8Q9BRL6 282 aaKnown RBP13.32□□□□□ -0.28
MCF2L-229ENST00000488765 DMXL1Q9Y485 3027 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 MGAQ8IWI9 3026 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 HBZP02008 142 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 REG1AP05451 166 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 ADH4P08319 380 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 FAM120AOSQ5T036 256 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 Q6ZS49 121 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 PSG11Q9UQ72 335 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 PRAMEF5Q5TYX0 476 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 DCTN5Q9BTE1 182 aa13.32□□□□□ -0.28
MCF2L-229ENST00000488765 ROS1P08922 2347 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 CXCL13O43927 109 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 OR2H2O95918 312 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 IGLV2-8P01709 118 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 HSD52Q0P140 79 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 SMIM27A0A1W2PRY6 76 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 C9orf118A6NHY6 69 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 K7EP34 96 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 K7ERJ3 54 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 SUMO3P55854 103 aaPredicted RBP13.31□□□□□ -0.28
MCF2L-229ENST00000488765 Q6ZSR3 168 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 OR2Z1Q8NG97 314 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 BLNKQ8WV28 456 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 PGLYRP4Q96LB8 373 aa13.31□□□□□ -0.28
MCF2L-229ENST00000488765 C9JCJ5 164 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-229ENST00000488765 PLAUP00749 431 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 OPRK1P41145 380 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 SRYQ05066 204 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 OR8A1Q8NGG7 326 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 SAP25Q8TEE9 199 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 RAB1CQ92928 201 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 C1orf159Q96HA4 380 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 C1QTNF5Q9BXJ0 243 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 CSMD1Q96PZ7 3565 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 C10orf142B7Z368 130 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 CCL3P10147 92 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 MAP1LC3CQ9BXW4 147 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 OSTCQ9NRP0 149 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 TPRP12270 2363 aaKnown RBP13.3□□□□□ -0.28
MCF2L-229ENST00000488765 PIEZO2Q9H5I5 2752 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 H3BTX0 84 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 ZFAND5O76080 213 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 GRPP07492 148 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 NEGR1Q7Z3B1 354 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
MCF2L-229ENST00000488765 KLF13Q9Y2Y9 288 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-229ENST00000488765 K7EQM0 130 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 GNG5P63218 68 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 CCDC144NLQ6NUI1 221 aa13.29□□□□□ -0.28
MCF2L-229ENST00000488765 OR4A16Q8NH70 328 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms