RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 CGB1A6NKQ9 187 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 J3QL48 77 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 WRBO00258 174 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 MED6O75586 246 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 NXPH3O95157 252 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 PRH1P02810 166 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 CRYGCP07315 174 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 SPNP16150 400 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 CTRB1P17538 263 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 ATP5G2Q06055 141 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
CLIP2-204ENST00000474962 CTRB2Q6GPI1 263 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 USMG5Q96IX5 58 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 GSKIPQ9P0R6 139 aa9.14□□□□□ -0.95
CLIP2-204ENST00000474962 RYR3Q15413 4870 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 A0A1B0GW64 132 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 FAM90A26D6RGX4 464 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 RHOGP84095 191 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 RUNX1Q01196 453 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 WT1-ASQ06250 92 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 ZNF616Q08AN1 781 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 GSG1LQ6UXU4 331 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 OR2C3Q8N628 320 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 NECAP1Q8NC96 275 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 DCUN1D4Q92564 292 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 FBXL7Q9UJT9 491 aa9.13□□□□□ -0.95
CLIP2-204ENST00000474962 SORL1Q92673 2214 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 FAM223BA6NKX1 122 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 CCSO14618 274 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 OR2J3O76001 311 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 BRI3O95415 125 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 SCGB1D2O95969 90 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 IGHV3-11P01762 117 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 OR8U8P0C7N1 319 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 NKX2-1P43699 371 aaPredicted RBP9.12□□□□□ -0.95
CLIP2-204ENST00000474962 TNFRSF9Q07011 255 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 TATDN3Q17R31 274 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 AARDQ4LEZ3 155 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 NOXA1Q86UR1 476 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 FAM223AQ8IWN6 122 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 OR1P1Q8NH06 330 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 DTD1Q8TEA8 209 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 DLX4Q92988 240 aaPredicted RBP9.12□□□□□ -0.95
CLIP2-204ENST00000474962 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
CLIP2-204ENST00000474962 ASCL2Q99929 193 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 RBKSQ9H477 322 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 HSPB7Q9UBY9 170 aa9.12□□□□□ -0.95
CLIP2-204ENST00000474962 F11RQ9Y624 299 aaKnown RBP9.12□□□□□ -0.95
CLIP2-204ENST00000474962 GOSR2O14653 212 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 PITX3O75364 302 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 LY86O95711 162 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 IFNA10P01566 189 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 HTR2BP41595 481 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 SLURP1P55000 103 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 RPP30P78346 268 aaKnown RBP9.11□□□□□ -0.95
CLIP2-204ENST00000474962 C15orf32Q32M92 178 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 ZBTB8BQ8NAP8 495 aaPredicted RBP9.11□□□□□ -0.95
CLIP2-204ENST00000474962 MISP3Q96FF7 219 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 OR10C1Q96KK4 312 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 C2orf50Q96LR7 162 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 MAGT1Q9H0U3 335 aa9.11□□□□□ -0.95
CLIP2-204ENST00000474962 ZNF256Q9Y2P7 627 aaPredicted RBP9.11□□□□□ -0.95
CLIP2-204ENST00000474962 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 TRBV9A0A0B4J1U6 114 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 MPTX1A8MV57 137 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 INS-IGF2F8WCM5 200 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 OVOL1O14753 267 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 SYNGR2O43760 224 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 LGALS1P09382 135 aaKnown RBP9.1□□□□□ -0.95
CLIP2-204ENST00000474962 NHLRC4P0CG21 123 aaPredicted RBP9.1□□□□□ -0.95
CLIP2-204ENST00000474962 OXA1LQ15070 435 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 FAM209BQ5JX69 171 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 C19orf35Q6ZS72 473 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 EEF1AKMT3Q96AZ1 226 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 PINX1Q96BK5 328 aaKnown RBP9.1□□□□□ -0.95
CLIP2-204ENST00000474962 CXorf58Q96LI9 332 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 FANCD2OSQ96PS1 177 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 MED28Q9H204 178 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 PAIP2BQ9ULR5 123 aaKnown RBP9.1□□□□□ -0.95
CLIP2-204ENST00000474962 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 U3KQ87 197 aa9.1□□□□□ -0.95
CLIP2-204ENST00000474962 HUWE1Q7Z6Z7 4374 aaKnown RBP9.1□□□□□ -0.95
CLIP2-204ENST00000474962 IGLV11-55A0A075B6I3 123 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 IGHV4OR15-8A0A075B7B6 117 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 A0A087WW49 117 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 ANKRD34BA5PLL1 514 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 L7N2F9 121 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 CORTO00230 105 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 NDUFB8O95169 186 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 IAPPP10997 89 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 INSL3P51460 131 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 ATP5IP56385 69 aaPredicted RBP9.09□□□□□ -0.95
CLIP2-204ENST00000474962 RAB11AP62491 216 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 VAMP2P63027 116 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 CYCSP99999 105 aaKnown RBP9.09□□□□□ -0.95
CLIP2-204ENST00000474962 DEFA5Q01523 94 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 ID3Q02535 119 aa9.09□□□□□ -0.95
CLIP2-204ENST00000474962 EXOSC2Q13868 293 aaKnown RBP9.09□□□□□ -0.95
CLIP2-204ENST00000474962 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms