RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 MAST2Q6P0Q8 1798 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 SDK2Q58EX2 2172 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 IGLV3-9A0A075B6K5 115 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 TRAV4A0A0B4J268 109 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 A0A0D9SEW6 157 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 OR51F1A6NGY5 319 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 TRAPPC2LH3BP13 241 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 C19orf84I3L1E1 186 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 CIAO1O76071 339 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 ATG12O94817 140 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 IFNA1P01562 189 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 TMEM258P61165 79 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 RELAQ04206 551 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 FAM27BQ5VT28 67 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 LCA10Q71F78 164 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 PFN4Q8NHR9 129 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 NEK7Q8TDX7 302 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 ZCCHC13Q8WW36 166 aaKnown RBP1.88□□□□□ -2.11
SMC4-208ENST00000467468 C11orf40Q8WZ69 217 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 SCGB3A1Q96QR1 104 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 TIMM21Q9BVV7 248 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 TTTY12Q9BZ98 90 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 COL4A2P08572 1712 aa1.88□□□□□ -2.11
SMC4-208ENST00000467468 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 TRBV19A0A075B6N1 114 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 A0A1B0GVG6 124 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 ZNF705FA8MVS1 300 aaPredicted RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 RTEL1-TNFRSF6BF6WH68 1400 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 H3BRN7 92 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 J3QQQ9 107 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 J3QRK9 145 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 S1PR2O95136 353 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 CASP1P29466 404 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 PEBP1P30086 187 aaKnown RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 RPL26P61254 145 aaKnown RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 ARHGAP11BQ3KRB8 267 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 MIR17HGQ75NE6 70 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 BPIFA4PQ86YQ2 179 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 TMEM106AQ96A25 262 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 DOCK6Q96HP0 2047 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 HOPXQ9BPY8 73 aaPredicted RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 BOLA2Q9H3K6 86 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 RPL26L1Q9UNX3 145 aaKnown RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 ERGIC3Q9Y282 383 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 UTP11Q9Y3A2 253 aaKnown RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 SCAF11Q99590 1463 aaKnown RBP1.87□□□□□ -2.11
SMC4-208ENST00000467468 SCN9AQ15858 1988 aa1.87□□□□□ -2.11
SMC4-208ENST00000467468 PTPRSQ13332 1948 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 HMSDA8MTL9 139 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 HMGB3O15347 200 aaKnown RBP1.86□□□□□ -2.11
SMC4-208ENST00000467468 NAPSAO96009 420 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 OR4E1P0C645 316 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 S100A4P26447 101 aaKnown RBP1.86□□□□□ -2.11
SMC4-208ENST00000467468 ATP5G3P48201 142 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 EIF2B2P49770 351 aaKnown RBP1.86□□□□□ -2.11
SMC4-208ENST00000467468 DEFA3P59666 94 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 YPEL3P61236 119 aaPredicted RBP1.86□□□□□ -2.11
SMC4-208ENST00000467468 B2MP61769 119 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 LINC01554Q52M75 96 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 CLVS1Q8IUQ0 354 aaPredicted RBP1.86□□□□□ -2.11
SMC4-208ENST00000467468 TMEM86AQ8N2M4 240 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 OR52R1Q8NGF1 315 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 DNAJC9Q8WXX5 260 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 TXNDC17Q9BRA2 123 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 PRNDQ9UKY0 176 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 KIF13BQ9NQT8 1826 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 TOPBP1Q92547 1522 aa1.86□□□□□ -2.11
SMC4-208ENST00000467468 ROCK1Q13464 1354 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 MEIS3P1A6NDR6 274 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 CLDN25C9JDP6 229 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 CLPSP04118 112 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 FABP1P07148 127 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 TRGC1P0CF51 173 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 P0DMU3 169 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 FAM231AP0DMU4 169 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 FAM231CP0DMU5 169 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 SPI1P17947 270 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 PIGPP57054 158 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 GNG3P63215 75 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 NDUFA5Q16718 116 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 LYRM7Q5U5X0 104 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 TRAPPC6BQ86SZ2 158 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 LRRC28Q86X40 367 aaPredicted RBP1.85□□□□□ -2.11
SMC4-208ENST00000467468 HIST3H2BBQ8N257 126 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 OR13C6PQ8NH95 151 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 GINS3Q9BRX5 216 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 ATPIF1Q9UII2 106 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 BAIAP2Q9UQB8 552 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 V9GYQ6 96 aa1.85□□□□□ -2.11
SMC4-208ENST00000467468 COL5A1P20908 1838 aaPredicted RBP1.84□□□□□ -2.11
SMC4-208ENST00000467468 FMN1Q68DA7 1419 aa1.84□□□□□ -2.11
SMC4-208ENST00000467468 ZNF860A6NHJ4 632 aa1.84□□□□□ -2.11
SMC4-208ENST00000467468 PGLYRP1O75594 196 aaPredicted RBP1.84□□□□□ -2.11
SMC4-208ENST00000467468 IFNA7P01567 189 aa1.84□□□□□ -2.11
SMC4-208ENST00000467468 IGKV1-16P04430 117 aa1.84□□□□□ -2.11
SMC4-208ENST00000467468 RPSAP08865 295 aaKnown RBP1.84□□□□□ -2.11
SMC4-208ENST00000467468 METTL15P1P0C7V9 234 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms