RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LYZL2Q7Z4W2 148 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 RNASE11Q8TAA1 199 aaKnown RBP7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 SCARB1Q8WTV0 552 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 PDCD10Q9BUL8 212 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 ELOVL1Q9BW60 279 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 ZNF436Q9C0F3 470 aaPredicted RBP7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 PRR13Q9NZ81 148 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 A0A1B0GU03 582 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 WI2-2373I1.2A0A1W2PRP0 233 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 C9orf170A2RU37 121 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 A8MWP6 167 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 TGOLN2O43493 480 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 SAP30O75446 220 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 IGHV3-23P01764 117 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 CLEC3BP05452 202 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 ARL3P36405 182 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 SMCO1Q147U7 214 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 SPSB3Q6PJ21 355 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 ADAMTSL5Q6ZMM2 481 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 BSCL2Q96G97 398 aaPredicted RBP7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZNF414Q96IQ9 312 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR4C12Q96R67 309 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 TXN2Q99757 166 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 WDR12Q9GZL7 423 aaKnown RBP7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 C21orf62Q9NYP8 219 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 HSPB7Q9UBY9 170 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 FLVCR2Q9UPI3 526 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 TMED3Q9Y3Q3 217 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 S4R3C0 116 aa7.21□□□□□ -1.26
SDCCAG3-208ENST00000466579 LINC00854A0A1B0GVQ3 168 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 CORTO00230 105 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR2C1O95371 312 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 VAMP1P23763 118 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 GPR183P32249 361 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 ADMP35318 185 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 SNCAP37840 140 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 HTR2BP41595 481 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 HOXA1P49639 335 aaPredicted RBP7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 SUB1P53999 127 aaKnown RBP eCLIP7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 TNFRSF9Q07011 255 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 DHRS2Q13268 280 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 ASAH1Q13510 395 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZNF846Q147U1 533 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 SPINK9Q5DT21 86 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 GAR1Q9NY12 217 aaKnown RBP7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 PEMTQ9UBM1 199 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 TBC1D24Q9ULP9 559 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZNF256Q9Y2P7 627 aaPredicted RBP7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 LSM4Q9Y4Z0 139 aaKnown RBP7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 DNAH9Q9NYC9 4486 aa7.2□□□□□ -1.26
SDCCAG3-208ENST00000466579 TMEM213A2RRL7 107 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 C2orf70A6NJV1 201 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 FAM90A26D6RGX4 464 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 UPK1BO75841 260 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 MT-CO2P00403 227 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 TCRBP04435 133 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 CTSGP08311 255 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR4E1P0C645 316 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 C8orf88P0DMB2 117 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 MFAP4P55083 255 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 ELLP55199 621 aaPredicted RBP7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 ATP5IP56385 69 aaPredicted RBP7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 FAM106AQ4KMX7 169 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 C2orf83Q53S99 150 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 PLET1Q6UQ28 207 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 LYG2Q86SG7 212 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR2K2Q8NGT1 345 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 MRAPQ8TCY5 172 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 TMEM170AQ8WVE7 144 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 MISP3Q96FF7 219 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 CHRDL1Q9BU40 450 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 C20orf85Q9H1P6 137 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 ENY2Q9NPA8 101 aa7.19□□□□□ -1.26
SDCCAG3-208ENST00000466579 OR2T8A6NH00 312 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 NDUFA4O00483 81 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 SPNP16150 400 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 ANXA7P20073 488 aaKnown RBP7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 IFITM3Q01628 133 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 DCTN2Q13561 401 aaKnown RBP7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 GGNBP1Q5YKI7 109 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 UNQ9165/PRO28630Q6UXU0 137 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 SLC24A4Q8NFF2 622 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 RNASEH2CQ8TDP1 164 aaKnown RBP7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 MITD1Q8WV92 249 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 TMEM190Q8WZ59 177 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 MARC2Q969Z3 335 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 FNDC4Q9H6D8 234 aaPredicted RBP7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 ZC4H2Q9NQZ6 224 aa7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 TECRQ9NZ01 308 aaKnown RBP7.18□□□□□ -1.26
SDCCAG3-208ENST00000466579 TGP01266 2768 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 CEBPZOSA8MTT3 80 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 K7EMT4 169 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 FOLR2P14207 255 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 GP9P14770 177 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 CBLN1P23435 193 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 DEFB114Q30KQ6 69 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 MZT2BQ6NZ67 158 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 NOXA1Q86UR1 476 aa7.17□□□□□ -1.26
SDCCAG3-208ENST00000466579 DUSP18Q8NEJ0 188 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms