RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 LBHQ53QV2 105 aaPredicted RBP14.3□□□□□ -0.12
SGCB-201ENST00000381431 TMEM144Q7Z5S9 345 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 ZNF738Q8NE65 137 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 RNASE7Q9H1E1 156 aaKnown RBP14.3□□□□□ -0.12
SGCB-201ENST00000381431 IGHV1-18A0A0C4DH31 117 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 NPIPB11E5RHQ5 1161 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 NMSQ5H8A3 153 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 METTL26Q96S19 204 aa14.3□□□□□ -0.12
SGCB-201ENST00000381431 IGKV1-5P01602 117 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 CD24P25063 80 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 RPP25LQ8N5L8 163 aaKnown RBP14.29□□□□□ -0.12
SGCB-201ENST00000381431 BMPERQ8N8U9 685 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 WNK1Q9H4A3 2382 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 CUL9Q8IWT3 2517 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 TM4SF5O14894 197 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 CLEC2AQ6UVW9 174 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 ZFP30Q9Y2G7 519 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 MYO18BQ8IUG5 2567 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 FOLR2P14207 255 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.29□□□□□ -0.12
SGCB-201ENST00000381431 OR52E5Q8NH55 327 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 ZNF502Q8TBZ5 544 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 DPM3Q9P2X0 92 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 WDR83OSQ9Y284 106 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 TMEM42Q69YG0 159 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
SGCB-201ENST00000381431 FOXA2Q9Y261 457 aaPredicted RBP14.29□□□□□ -0.12
SGCB-201ENST00000381431 TMPRSS3P57727 454 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 ST6GALNAC3Q8NDV1 305 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 FAM57AQ8TBR7 257 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 LINC00312Q9Y6C7 94 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 ANAPC1Q9H1A4 1944 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 A6NDN8 102 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 PEX7O00628 323 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 PRB4P10163 310 aaPredicted RBP14.28□□□□□ -0.12
SGCB-201ENST00000381431 RELQ04864 619 aaPredicted RBP14.28□□□□□ -0.12
SGCB-201ENST00000381431 KLK15Q9H2R5 256 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 CDC42EP3Q9UKI2 254 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 DPRXA6NFQ7 191 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 CXCL1P09341 107 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 CTAG1AP78358 180 aa14.28□□□□□ -0.12
SGCB-201ENST00000381431 TBL2Q9Y4P3 447 aaKnown RBP14.28□□□□□ -0.12
SGCB-201ENST00000381431 SIAH2O43255 324 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.12
SGCB-201ENST00000381431 B3GALT5-AS1P59052 145 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 GFI1BQ5VTD9 330 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 LEMD1Q68G75 181 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 C14orf144Q96I85 54 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 ELOVL5Q9NYP7 299 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 UPK2O00526 184 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 TM4SF20Q53R12 229 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 C10orf55Q5SWW7 151 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 HEPN1Q6WQI6 88 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 REC114Q7Z4M0 266 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 OCC1Q8TAD7 63 aa14.27□□□□□ -0.12
SGCB-201ENST00000381431 IGHV3-66A0A0C4DH42 116 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 A0A0G2JRQ6 117 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 C15orf61A6NNL5 157 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 FOXI3A8MTJ6 420 aaPredicted RBP14.27□□□□□ -0.13
SGCB-201ENST00000381431 PYYP10082 97 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 HBBP68871 147 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 RNFT1Q5M7Z0 435 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 DCAF16Q9NXF7 216 aa14.27□□□□□ -0.13
SGCB-201ENST00000381431 TRAV30A0A087WSZ9 112 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 IGKV1D-33P01593 117 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 IGKV1-33P01594 117 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 MBD3L1Q8WWY6 194 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 CACNG8Q8WXS5 425 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 AP5S1Q9NUS5 200 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 ANOS1P23352 680 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 TBR1Q16650 682 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 Q6ZRM9 215 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 OR10W1Q8NGF6 305 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 TRBV9A0A0B4J1U6 114 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 SLC25A34Q6PIV7 304 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 C20orf204Q6ZNR8 217 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 OR10J6PQ8NGY7 276 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 ATG101Q9BSB4 218 aa14.26□□□□□ -0.13
SGCB-201ENST00000381431 CEACAM1P13688 526 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 PSMB2P49721 201 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 YLPM1P49750 1951 aaKnown RBP14.25□□□□□ -0.13
SGCB-201ENST00000381431 SRSF6Q13247 344 aaKnown RBP14.25□□□□□ -0.13
SGCB-201ENST00000381431 RAB37Q96AX2 223 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 SERF1AO75920 110 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 IGKV3-15P01624 115 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 CX3CL1P78423 397 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 MEF2CQ06413 473 aaPredicted RBP14.25□□□□□ -0.13
SGCB-201ENST00000381431 EFNB3Q15768 340 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 FAM90A1Q86YD7 464 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 CHODLQ9H9P2 273 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 SRRM5B3KS81 715 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 GNG5P63218 68 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 ADCYAP1P18509 176 aa14.25□□□□□ -0.13
SGCB-201ENST00000381431 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 HERPUD1Q15011 391 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 OR10AG1Q8NH19 301 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 C1orf147Q96MC9 270 aaPredicted RBP14.24□□□□□ -0.13
SGCB-201ENST00000381431 C1QL4Q86Z23 238 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 MED13Q9UHV7 2174 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms