RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-212ENST00000546744 DNAL4O96015 105 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 C1QTNF5Q9BXJ0 243 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 FAM181BA6NEQ2 426 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 SPINT1O43278 529 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 PRSS2P07478 247 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 CELA2BP08218 269 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-212ENST00000546744 NMSQ5H8A3 153 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 FAM53AQ6NSI3 398 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-212ENST00000546744 Q6ZS49 121 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 TMEM160Q9NX00 188 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 NHP2Q9NX24 153 aaKnown RBP10.8□□□□□ -0.68
PTCH1-212ENST00000546744 CLEC5AQ9NY25 188 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 HS3ST3B1Q9Y662 390 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 SYNGR3O43761 229 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 PFN1P07737 140 aaKnown RBP10.8□□□□□ -0.68
PTCH1-212ENST00000546744 OR9G9P0C7N8 305 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 CX3CL1P78423 397 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 SLC25A48Q6ZT89 311 aaKnown RBP10.8□□□□□ -0.68
PTCH1-212ENST00000546744 CCL17Q92583 94 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 ST6GALNAC6Q969X2 333 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 OTORQ9NRC9 128 aa10.8□□□□□ -0.68
PTCH1-212ENST00000546744 LINC00305Q7Z4B0 112 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 NPIPB3Q92617 1050 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 C2CD4DB7Z1M9 353 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 RHOGP84095 191 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 TPTE2P1Q5T6R2 138 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 CST9LQ9H4G1 147 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 TRAV8-2A0A0B4J237 113 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 TM4SF5O14894 197 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 IGHV3-13P01766 116 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 IGHV3-7P01780 117 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 C3AR1Q16581 482 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 MBNL2Q5VZF2 373 aaKnown RBP10.79□□□□□ -0.68
PTCH1-212ENST00000546744 REPIN1Q9BWE0 567 aaKnown RBP10.79□□□□□ -0.68
PTCH1-212ENST00000546744 PHLDA3Q9Y5J5 127 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 PPIAL4EA0A075B759 164 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 PPIAL4FP0DN26 164 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 ALKBH6Q3KRA9 238 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 PPIAL4AQ9Y536 164 aa10.79□□□□□ -0.68
PTCH1-212ENST00000546744 TMEM14EPQ6UXP3 125 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 SPTBN2O15020 2390 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 A0A0G2JMM0 328 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 A0A1W2PPB8 328 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 KIR3DP1A8MWS1 328 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 COX7A1P24310 79 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 IFI27L1Q96BM0 104 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 C12orf77C9JDV5 145 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 REG1AP05451 166 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 LPAL2Q16609 132 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 KRTCAP3Q53RY4 240 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 COA6Q5JTJ3 125 aaKnown RBP10.78□□□□□ -0.68
PTCH1-212ENST00000546744 HES3Q5TGS1 186 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 ST6GALNAC3Q8NDV1 305 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 OR5AN1Q8NGI8 311 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 METTL26Q96S19 204 aa10.78□□□□□ -0.68
PTCH1-212ENST00000546744 POLR3KQ9Y2Y1 108 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-212ENST00000546744 HOXA3O43365 443 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-212ENST00000546744 OR9G1Q8NH87 305 aa10.77□□□□□ -0.68
PTCH1-212ENST00000546744 LOXL4Q96JB6 756 aa10.77□□□□□ -0.68
PTCH1-212ENST00000546744 FOXC2Q99958 501 aa10.77□□□□□ -0.68
PTCH1-212ENST00000546744 IGFBP2P18065 325 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 MAJINQ3KP22 176 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 ZNF418Q8TF45 676 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-212ENST00000546744 CACNA1IQ9P0X4 2223 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 TDGF1P13385 188 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 ZNF585BQ52M93 769 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 TMEM256Q8N2U0 113 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 GPHA2Q96T91 129 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 DLX6P56179 175 aa10.77□□□□□ -0.69
PTCH1-212ENST00000546744 RPP25LQ8N5L8 163 aaKnown RBP10.77□□□□□ -0.69
PTCH1-212ENST00000546744 IGKV3D-11A0A0A0MRZ8 115 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 IGKV1-9A0A0C4DH69 117 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 PRR32B1ATL7 298 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 RPRMLQ8N4K4 120 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 EPDR1Q9UM22 224 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 H7C2G1 150 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 CDKN1BP46527 198 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 MPV17L2Q567V2 206 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 SPSB3Q6PJ21 355 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 SCN8AQ9UQD0 1980 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 H7C1H1 209 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 WNT9BO14905 357 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 YPEL3P61236 119 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-212ENST00000546744 EFNB3Q15768 340 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 ORMDL2Q53FV1 153 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 RNFT1Q5M7Z0 435 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 FAM214BQ7L5A3 538 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 FER1L6-AS1Q8NA97 138 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 SMRP1Q8NCR6 262 aa10.76□□□□□ -0.69
PTCH1-212ENST00000546744 FZR1Q9UM11 496 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms