RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TMEM68Q96MH6 324 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 RDH8Q9NYR8 311 aa13.08□□□□□ -0.32
PKP3-208ENST00000531857 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 SRRM4A7MD48 611 aaKnown RBP13.07□□□□□ -0.32
PKP3-208ENST00000531857 KCTD9Q7L273 389 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 ADAD2Q8NCV1 583 aaKnown RBP13.07□□□□□ -0.32
PKP3-208ENST00000531857 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 HARBI1Q96MB7 349 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 RTBDNQ9BSG5 229 aaPredicted RBP13.07□□□□□ -0.32
PKP3-208ENST00000531857 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 NMES1Q9C002 83 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 PEMTQ9UBM1 199 aa13.07□□□□□ -0.32
PKP3-208ENST00000531857 MSGN1A6NI15 193 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 BMPR1BO00238 502 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 PET100P0DJ07 73 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 SLC25A4P12235 298 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 EDN2P20800 178 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
PKP3-208ENST00000531857 A0A0D9SG52 128 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 IFNA21P01568 189 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 PRH1P02810 166 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 FCGR2CP31995 323 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 RND3P61587 244 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 LAMTOR1Q6IAA8 161 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.05□□□□□ -0.32
PKP3-208ENST00000531857 SRD5A3Q9H8P0 318 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 SDHAF2Q9NX18 166 aa13.05□□□□□ -0.32
PKP3-208ENST00000531857 TEX13DA0A0J9YY54 714 aaPredicted RBP13.04□□□□□ -0.32
PKP3-208ENST00000531857 CRYM-AS1A6NIL9 109 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 OR11H12B2RN74 326 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 SHOXO15266 292 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 IFNA7P01567 189 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 RPA2P15927 270 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 H2BFSP57053 126 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 RHOGP84095 191 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 IFITM2Q01629 132 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 DEFB114Q30KQ6 69 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 TMEM177Q53S58 311 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 LRTM2Q8N967 370 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 CABLES2Q9BTV7 478 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 OR2D2Q9H210 308 aa13.04□□□□□ -0.32
PKP3-208ENST00000531857 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 DUXBA0A1W2PPF3 345 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 L7N2F9 121 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 PPYP01298 95 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 OR2F1Q13607 317 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 EXOSC2Q13868 293 aaKnown RBP13.03□□□□□ -0.32
PKP3-208ENST00000531857 ZNF345Q14585 488 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 TNXAQ16473 311 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 CMTM1Q8IZ96 169 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 TMEM230Q96A57 120 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 NAA60Q9H7X0 242 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
PKP3-208ENST00000531857 SMLR1H3BR10 107 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 TUSC2O75896 110 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 MSMO1Q15800 293 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 PRSS8Q16651 343 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 GUCA2BQ16661 112 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 LGALSLQ3ZCW2 172 aaPredicted RBP13.02□□□□□ -0.33
PKP3-208ENST00000531857 IGSF11Q5DX21 431 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 OR11H4Q8NGC9 324 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 OR10J5Q8NHC4 309 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 DYNLRB2Q8TF09 96 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 SRSF12Q8WXF0 261 aaKnown RBP13.02□□□□□ -0.33
PKP3-208ENST00000531857 MAFIPQ8WZ33 124 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.33
PKP3-208ENST00000531857 C2orf50Q96LR7 162 aa13.02□□□□□ -0.33
PKP3-208ENST00000531857 FRAS1Q86XX4 4008 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 TRBV6-7A0A0A0MS04 114 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
PKP3-208ENST00000531857 TRBV9A0A0B4J1U6 114 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 C5orf51A6NDU8 294 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 PPP5D1E7EU14 171 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 G3V3Q6 166 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 GPR31O00270 319 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 BET1O15155 118 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 MPPED1O15442 326 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 PSMB6P28072 239 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 S100A11P31949 105 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
PKP3-208ENST00000531857 KIR2DS2P43631 304 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 PIGPP57054 158 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 ATP5G2Q06055 141 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 LGI3Q8N145 548 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 TEX45Q8NA69 505 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 ZBTB34Q8NCN2 500 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 ZC4H2Q9NQZ6 224 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 DMRT1Q9Y5R6 373 aa13.01□□□□□ -0.33
PKP3-208ENST00000531857 C2orf70A6NJV1 201 aa13□□□□□ -0.33
PKP3-208ENST00000531857 FAM223BA6NKX1 122 aa13□□□□□ -0.33
PKP3-208ENST00000531857 LY6G6CO95867 125 aa13□□□□□ -0.33
PKP3-208ENST00000531857 FOLR2P14207 255 aa13□□□□□ -0.33
PKP3-208ENST00000531857 UBE2KP61086 200 aa13□□□□□ -0.33
PKP3-208ENST00000531857 SUPT4H1P63272 117 aaKnown RBP13□□□□□ -0.33
PKP3-208ENST00000531857 RTL8BQ17RB0 113 aa13□□□□□ -0.33
PKP3-208ENST00000531857 ZNF546Q86UE3 836 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms