RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MARC2Q969Z3 335 aa6.52□□□□□ -1.37
SSBP3-212ENST00000528930 CCL28Q9NRJ3 127 aa6.52□□□□□ -1.37
SSBP3-212ENST00000528930 MBD2Q9UBB5 411 aa6.52□□□□□ -1.37
SSBP3-212ENST00000528930 EXTL2Q9UBQ6 330 aa6.52□□□□□ -1.37
SSBP3-212ENST00000528930 FOXA2Q9Y261 457 aaPredicted RBP6.52□□□□□ -1.37
SSBP3-212ENST00000528930 VSIG4Q9Y279 399 aa6.52□□□□□ -1.37
SSBP3-212ENST00000528930 F8W036 122 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 G3V3Q6 166 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 DNASE2O00115 360 aaPredicted RBP6.51□□□□□ -1.37
SSBP3-212ENST00000528930 RAMP3O60896 148 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 FCGR3BO75015 233 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 TSC22D2O75157 780 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 SCO1O75880 301 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 PPYP01298 95 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 ELK1P19419 428 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 UBE2KP61086 200 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 GNB1P62873 340 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 MSMO1Q15800 293 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 PRSS8Q16651 343 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 TMEM69Q5SWH9 247 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 DHRS11Q6UWP2 260 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 ZNF66Q6ZN08 573 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 KCTD9Q7L273 389 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 TOMM5Q8N4H5 51 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 GPX8Q8TED1 209 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 ABHD5Q8WTS1 349 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 PHYHIPLQ96FC7 376 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 OR5B12Q96R08 314 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 MCRIP2Q9BUT9 160 aaKnown RBP6.51□□□□□ -1.37
SSBP3-212ENST00000528930 ALX4Q9H161 411 aaPredicted RBP6.51□□□□□ -1.37
SSBP3-212ENST00000528930 GPN1Q9HCN4 374 aaPredicted RBP6.51□□□□□ -1.37
SSBP3-212ENST00000528930 BIN3Q9NQY0 253 aa6.51□□□□□ -1.37
SSBP3-212ENST00000528930 TNCP24821 2201 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 RAB19A4D1S5 217 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 L7N2F9 121 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 CNIH1O95406 144 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 BRI3O95415 125 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 S100A11P31949 105 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 PRSS3P35030 304 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 KLF9Q13886 244 aaPredicted RBP6.5□□□□□ -1.37
SSBP3-212ENST00000528930 GUCA2BQ16661 112 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 VMA21Q3ZAQ7 101 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 OR2B11Q5JQS5 317 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 TMEM17Q86X19 198 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 ZBTB34Q8NCN2 500 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 OR5T1Q8NG75 326 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 OR1N2Q8NGR9 330 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 OR2T35Q8NGX2 323 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 SECTM1Q8WVN6 248 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 RHOVQ96L33 236 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 TMEM68Q96MH6 324 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 LINC00052Q96N35 136 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 MS4A10Q96PG2 267 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 HSD17B10Q99714 261 aaKnown RBP6.5□□□□□ -1.37
SSBP3-212ENST00000528930 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
SSBP3-212ENST00000528930 COA4Q9NYJ1 87 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 TAS2R8Q9NYW2 309 aa6.5□□□□□ -1.37
SSBP3-212ENST00000528930 SORL1Q92673 2214 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 HSPG2P98160 4391 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 MSGN1A6NI15 193 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 SMLR1H3BR10 107 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 H3BUA1 57 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 TNFSF12O43508 249 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 GATCO43716 136 aaKnown RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 CFDP00746 253 aaPredicted RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 IGHV3-11P01762 117 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 PMP2P02689 132 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 TRGV3P03979 118 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 S100A8P05109 93 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 LGALS1P09382 135 aaKnown RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 SAA1P0DJI8 122 aaPredicted RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 CXCL3P19876 107 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 GNRHRP30968 328 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 FXYD4P59646 89 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 POLR2GP62487 172 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 ZNF616Q08AN1 781 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 TNXAQ16473 311 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 ZNF818PQ6ZRF7 136 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 VKORC1L1Q8N0U8 176 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 PUSL1Q8N0Z8 303 aaKnown RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 DMBX1Q8NFW5 382 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 OR4D10Q8NGI6 311 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 OR4S2Q8NH73 311 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 SMIM4Q8WVI0 70 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 TCTEX1D2Q8WW35 142 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 SRSF12Q8WXF0 261 aaKnown RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 PRR25Q96S07 402 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 SLC5A7Q9GZV3 580 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 ZMAT4Q9H898 229 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 EHFQ9NZC4 300 aa6.49□□□□□ -1.37
SSBP3-212ENST00000528930 MRPS7Q9Y2R9 242 aaKnown RBP6.49□□□□□ -1.37
SSBP3-212ENST00000528930 IGHV4OR15-8A0A075B7B6 117 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 A0A087WW49 117 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 A0A0D9SG52 128 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 E7EUB6 86 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 SSNA1O43805 119 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 RBMXL2O75526 392 aaKnown RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 OR8U8P0C7N1 319 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms