RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 OR5AN1Q8NGI8 311 aa17.3■□□□□ 0.36
VPS28-205ENST00000526204 CACNG8Q8WXS5 425 aa17.3■□□□□ 0.36
VPS28-205ENST00000526204 TMEM18Q96B42 140 aa17.3■□□□□ 0.36
VPS28-205ENST00000526204 HARBI1Q96MB7 349 aa17.3■□□□□ 0.36
VPS28-205ENST00000526204 MRPL20Q9BYC9 149 aaKnown RBP17.3■□□□□ 0.36
VPS28-205ENST00000526204 SAP30LQ9HAJ7 183 aa17.3■□□□□ 0.36
VPS28-205ENST00000526204 PPIAL4EA0A075B759 164 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 VSTM5A8MXK1 200 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 PPIAL4DF5H284 164 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 H0YJW9 148 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 PPIAL4FP0DN26 164 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 RNASE2P10153 161 aaKnown RBP17.29■□□□□ 0.36
VPS28-205ENST00000526204 DEFA6Q01524 100 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 BSPH1Q075Z2 132 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 TMEM177Q53S58 311 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 PQLC2Q6ZP29 291 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 COMMD5Q9GZQ3 224 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 PPIAL4AQ9Y536 164 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 NBEAQ8NFP9 2946 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 RAI1Q7Z5J4 1906 aaPredicted RBP17.29■□□□□ 0.36
VPS28-205ENST00000526204 INS-IGF2F8WCM5 200 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 TSTD3H0UI37 97 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 ACTL6BO94805 426 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 GCGP01275 180 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 TAS2R45P59539 299 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 PSG5Q15238 335 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 TMEM200BQ69YZ2 307 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 FAM71F2Q6NXP2 309 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 NDUFA4L2Q9NRX3 87 aa17.29■□□□□ 0.36
VPS28-205ENST00000526204 IGKV1OR2-108A0A075B7D4 117 aa17.28■□□□□ 0.36
VPS28-205ENST00000526204 TMEM178BH3BS89 294 aa17.28■□□□□ 0.36
VPS28-205ENST00000526204 OR10J1P30954 320 aa17.28■□□□□ 0.36
VPS28-205ENST00000526204 TDGF1P3P51864 188 aa17.28■□□□□ 0.36
VPS28-205ENST00000526204 RPL8P62917 257 aaKnown RBP17.28■□□□□ 0.36
VPS28-205ENST00000526204 ERHP84090 104 aaKnown RBP17.28■□□□□ 0.36
VPS28-205ENST00000526204 OR4A5Q8NH83 315 aa17.28■□□□□ 0.36
VPS28-205ENST00000526204 FLYWCH2Q96CP2 140 aaKnown RBP17.28■□□□□ 0.36
VPS28-205ENST00000526204 DYSFO75923 2080 aa17.28■□□□□ 0.36
VPS28-205ENST00000526204 GZMBP10144 247 aa17.27■□□□□ 0.36
VPS28-205ENST00000526204 USF1P22415 310 aaPredicted RBP17.27■□□□□ 0.36
VPS28-205ENST00000526204 GPX4P36969 197 aaPredicted RBP17.27■□□□□ 0.36
VPS28-205ENST00000526204 CD69Q07108 199 aa17.27■□□□□ 0.36
VPS28-205ENST00000526204 C8orf31Q8N9H6 132 aa17.27■□□□□ 0.36
VPS28-205ENST00000526204 VSTM2AQ8TAG5 236 aa17.27■□□□□ 0.36
VPS28-205ENST00000526204 THBDP07204 575 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 OR5G3P0C626 314 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 CCL3L1P16619 93 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 YPEL3P61236 119 aaPredicted RBP17.27■□□□□ 0.35
VPS28-205ENST00000526204 OR4C13Q8NGP0 309 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 FAM122AQ96E09 287 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 EAF1Q96JC9 268 aaPredicted RBP17.27■□□□□ 0.35
VPS28-205ENST00000526204 IL36BQ9NZH7 164 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 JKAMPQ9P055 326 aa17.27■□□□□ 0.35
VPS28-205ENST00000526204 LAMA5O15230 3695 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 DLL1O00548 723 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 NDUFB3O43676 98 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 LRRC10Q5BKY1 277 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 ASCL5Q7RTU5 278 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 MOB3BQ86TA1 216 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 ZCCHC24Q8N2G6 241 aaKnown RBP17.26■□□□□ 0.35
VPS28-205ENST00000526204 OR10X1Q8NGY0 326 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 TMEM186Q96B77 213 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 A0A1W2PN81 502 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 K7EN84 100 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 HNF1AP20823 631 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 PDPNQ86YL7 162 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 LINC00311Q8N616 119 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 ABHD17AQ96GS6 310 aa17.26■□□□□ 0.35
VPS28-205ENST00000526204 ZNF90Q03938 601 aa17.25■□□□□ 0.35
VPS28-205ENST00000526204 OR10W1Q8NGF6 305 aa17.25■□□□□ 0.35
VPS28-205ENST00000526204 TMEM167AQ8TBQ9 72 aa17.25■□□□□ 0.35
VPS28-205ENST00000526204 ZNF596Q8TC21 504 aa17.25■□□□□ 0.35
VPS28-205ENST00000526204 RNF2Q99496 336 aa17.25■□□□□ 0.35
VPS28-205ENST00000526204 TMEM106BQ9NUM4 274 aa17.25■□□□□ 0.35
VPS28-205ENST00000526204 HELTA6NFD8 242 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 CHRNB4P30926 498 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 GBGT1Q8N5D6 347 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 H1FXQ92522 213 aaKnown RBP17.24■□□□□ 0.35
VPS28-205ENST00000526204 CCL17Q92583 94 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 TNFRSF13BO14836 293 aaPredicted RBP17.24■□□□□ 0.35
VPS28-205ENST00000526204 OR7C2O60412 319 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 NBL1P41271 181 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 GNG4P50150 75 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 SSX2Q16385 188 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 PRSS8Q16651 343 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 GFRALQ6UXV0 394 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 OR9G1Q8NH87 305 aa17.24■□□□□ 0.35
VPS28-205ENST00000526204 MRPL32Q9BYC8 188 aaKnown RBP17.24■□□□□ 0.35
VPS28-205ENST00000526204 PLCE1Q9P212 2302 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 C8orf88P0DMB2 117 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 HLA-DRB5Q30154 266 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 ZNF503Q96F45 646 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 A0A1W2PRE2 83 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 FCN3O75636 299 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 DDTP30046 118 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 MLANAQ16655 118 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 SLC25A33Q9BSK2 321 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 NGBQ9NPG2 151 aa17.23■□□□□ 0.35
VPS28-205ENST00000526204 GVINP1Q7Z2Y8 2422 aa17.22■□□□□ 0.35
VPS28-205ENST00000526204 GATA2P23769 480 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms