RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 USH1CQ9Y6N9 552 aa1.32□□□□□ -2.2
LINC01088-211ENST00000515597 TRAV8-7A0A075B6U6 113 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 RNASEK-C17orf49H0YIS7 233 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 FFAR1O14842 300 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 FADS1O60427 444 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 CRTAPO75718 401 aaPredicted RBP1.31□□□□□ -2.2
LINC01088-211ENST00000515597 GPR75O95800 540 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 SRMP19623 302 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 RPA3P35244 121 aaPredicted RBP1.31□□□□□ -2.2
LINC01088-211ENST00000515597 XKP51811 444 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 CTBP2P56545 445 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 FGF12P61328 243 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 ERVS71-1P61550 626 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 BLCAPP62952 87 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 SLC35A2P78381 396 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 CCL8P80075 99 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 DYNC1I2Q13409 638 aaKnown RBP1.31□□□□□ -2.2
LINC01088-211ENST00000515597 STK38Q15208 465 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 TRIP13Q15645 432 aaPredicted RBP1.31□□□□□ -2.2
LINC01088-211ENST00000515597 C18orf21Q32NC0 220 aaPredicted RBP1.31□□□□□ -2.2
LINC01088-211ENST00000515597 Q5VSD8 79 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 CCDC121Q6ZUS5 278 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 ZNF567Q8N184 647 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 TEX29Q8N6K0 151 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 OR4S1Q8NGB4 309 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 OR51L1Q8NGJ5 315 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 OR10D4PQ8NGN7 298 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 RORBQ92753 470 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 RAB8BQ92930 207 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 MUCL1Q96DR8 90 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 BIRC8Q96P09 236 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 VAT1Q99536 393 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 UBAP1Q9NZ09 502 aa1.31□□□□□ -2.2
LINC01088-211ENST00000515597 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 ERICH4A6NGS2 130 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 FAM25EA8MYX2 175 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 TP53I11O14683 189 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 MBP02144 154 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 SMR3BP02814 79 aaPredicted RBP1.3□□□□□ -2.2
LINC01088-211ENST00000515597 GUSBP08236 651 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 CTLA4P16410 223 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 DEKP35659 375 aaKnown RBP1.3□□□□□ -2.2
LINC01088-211ENST00000515597 DSCR4P56555 118 aaPredicted RBP1.3□□□□□ -2.2
LINC01088-211ENST00000515597 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 TBPL1P62380 186 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 NDUFAF6Q330K2 333 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 HSP90B2PQ58FF3 399 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 FAM201AQ5SY85 155 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 GLYATQ6IB77 296 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 ERICH5Q6P6B1 374 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
LINC01088-211ENST00000515597 MARCH3Q86UD3 253 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 MSRB3Q8IXL7 192 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 DYNAPQ8N1N2 210 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 ZIC4Q8N9L1 334 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 OR2V1Q8NHB1 315 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 TMBIM1Q969X1 311 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 PITX2Q99697 317 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 CDCA4Q9BXL8 241 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 CXorf21Q9HAI6 301 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 VCX3AQ9NNX9 186 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 VAPAQ9P0L0 249 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 CYB5R1Q9UHQ9 305 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 VPREB3Q9UKI3 123 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 V9GYY9 64 aa1.3□□□□□ -2.2
LINC01088-211ENST00000515597 TRBV24-1A0A075B6N3 115 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 IGLV3-32A0A0A0MS00 114 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 A0A1W2PPV4 95 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 GOLGA8KD6RF30 607 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 F8VZ95 297 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 M0R2N4 97 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 PRMT5O14744 637 aaPredicted RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 IGF2P01344 180 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 IGHV1-69P01742 117 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 SERPINA6P08185 405 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 MT1HL1P0DM35 61 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 CGB3P0DN86 165 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 CGB7P0DN87 165 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 ZNF22P17026 224 aaPredicted RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 SYT1P21579 422 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 MSNP26038 577 aaKnown RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 RPL22P35268 128 aaKnown RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 RAB13P51153 203 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 CARD18P57730 90 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 REEP5Q00765 189 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 STX4Q12846 297 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 EXOC3L4Q17RC7 722 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 CEACAM16Q2WEN9 425 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 TRMT12Q53H54 448 aaKnown RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 HBMQ6B0K9 141 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 NOXRED1Q6NXP6 359 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 AGTRAPQ6RW13 159 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 SCIMPQ6UWF3 145 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 LRRC28Q86X40 367 aaPredicted RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 RBM45Q8IUH3 476 aaKnown RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 MNS1Q8NEH6 495 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 CASTOR1Q8WTX7 329 aa1.29□□□□□ -2.2
LINC01088-211ENST00000515597 ZNF436Q9C0F3 470 aaPredicted RBP1.29□□□□□ -2.2
LINC01088-211ENST00000515597 CENPHQ9H3R5 247 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms