RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ADAT1Q9BUB4 502 aaKnown RBP0.47□□□□□ -2.33
SCAF11-207ENST00000484275 OR8D2Q9GZM6 311 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 EFCAB1Q9HAE3 211 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 XPNPEP1Q9NQW7 623 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 NUP210LQ5VU65 1888 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 PLXNA4Q9HCM2 1894 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 BAZ2BQ9UIF8 2168 aaKnown RBP0.47□□□□□ -2.33
SCAF11-207ENST00000484275 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 LAMB4A4D0S4 1761 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 RIC1Q4ADV7 1423 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 SETD5Q9C0A6 1442 aa0.47□□□□□ -2.33
SCAF11-207ENST00000484275 NUP155O75694 1391 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 KIF24Q5T7B8 1368 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 TONSLQ96HA7 1378 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 HECW2Q9P2P5 1572 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 A0A0J9YY10 115 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 A0A1B0GX78 115 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 SMIM23A6NLE4 172 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 FABP5P3A8MUU1 101 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 EVPLLA8MZ36 301 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 IBA57-AS1B1ANH7 110 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 M0R036 132 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 PSMD12O00232 456 aaPredicted RBP0.46□□□□□ -2.34
SCAF11-207ENST00000484275 TGOLN2O43493 480 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 PRM2P04554 102 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 REG1BP48304 166 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 NKX2-5P52952 324 aaPredicted RBP0.46□□□□□ -2.34
SCAF11-207ENST00000484275 IFITM2Q01629 132 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 OR2F1Q13607 317 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 GRK1Q15835 563 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 CDKL4Q5MAI5 379 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 SPANXN3Q5MJ09 141 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 C10orf55Q5SWW7 151 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 SFXN4Q6P4A7 337 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 RPL22L1Q6P5R6 122 aaKnown RBP0.46□□□□□ -2.34
SCAF11-207ENST00000484275 OTUD6BQ8N6M0 293 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 MCFD2Q8NI22 146 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 DDI1Q8WTU0 396 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 RASSF5Q8WWW0 418 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 C11orf40Q8WZ69 217 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 SLC35B4Q969S0 331 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 OR52E6Q96RD3 313 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 YIPF3Q9GZM5 350 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 WDR61Q9GZS3 305 aaKnown RBP0.46□□□□□ -2.34
SCAF11-207ENST00000484275 GUCA1BQ9UMX6 200 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 NOSIPQ9Y314 301 aaKnown RBP0.46□□□□□ -2.34
SCAF11-207ENST00000484275 LHFPL6Q9Y693 200 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 TNRC6AQ8NDV7 1962 aaKnown RBP0.46□□□□□ -2.34
SCAF11-207ENST00000484275 ARFGEF3Q5TH69 2177 aa0.46□□□□□ -2.34
SCAF11-207ENST00000484275 POLEQ07864 2286 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 MYH10P35580 1976 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 TRBV20OR9-2A0A075B6H5 130 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 EEF1E1-BLOC1S5C9J1V9 151 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 INMT-MINDY4F8WBC2 141 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 IFNA5P01569 189 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 IGKV1-5P01602 117 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 CLPSP04118 112 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 SHBGP04278 402 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H1EP10412 219 aaKnown RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 CD79AP11912 226 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 RPS4Y1P22090 263 aaKnown RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BOP23527 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BBP33778 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 SULT1A1P50225 295 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 TCL1AP56279 114 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BDP58876 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 SPCS3P61009 180 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 PSME3P61289 254 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 SNRPD2P62316 118 aaKnown RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BCP62807 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 ZNF345Q14585 488 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 CDK5R1Q15078 307 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 GUK1Q16774 197 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST2H2BEQ16778 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 CCDC122Q5T0U0 273 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 AADACL3Q5VUY0 350 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 LPCAT4Q643R3 524 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 PTRHD1Q6GMV3 140 aaKnown RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 LPCAT3Q6P1A2 487 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 ALKAL1Q6UXT8 129 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 DEFB128Q7Z7B8 93 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 IQCF2Q8IXL9 164 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 Q8N2B8 174 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 TMEM86BQ8N661 226 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 C12orf29Q8N999 325 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 C9orf163Q8N9P6 203 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 ZNF439Q8NDP4 499 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 OR4D11Q8NGI4 311 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 OR13C4Q8NGS5 318 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 OR4C6Q8NH72 309 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BHQ93079 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 IMP4Q96G21 291 aaKnown RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 ERMAPQ96PL5 475 aaPredicted RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 SCGB3A1Q96QR1 104 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BNQ99877 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H2BMQ99879 126 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 COMMD5Q9GZQ3 224 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 PRTFDC1Q9NRG1 225 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 OR5AC2Q9NZP5 309 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms