RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 C15orf61A6NNL5 157 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 K7EMT4 169 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 APOA1P02647 267 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 RCVRNP35243 200 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 RPS19P39019 145 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 CMC4P56277 68 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 OR4A16Q8NH70 328 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 SLC25A46Q96AG3 418 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 FXYD6Q9H0Q3 95 aa10.8□□□□□ -0.68
SMARCE1-209ENST00000478349 KIR2DL5BA0A0G2JN68 375 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 KIR2DL5BA0A0G2JPC4 375 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 NUPR2A6NF83 97 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 ATG12O94817 140 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 CD5P06127 495 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 HLA-DMAP28067 261 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 LSM3P62310 102 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 KIR2DL5AQ8N109 375 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 STPG3Q8N7X2 389 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 KIR2DL5BQ8NHK3 375 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 SCARB1Q8WTV0 552 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 YIPF6Q96EC8 236 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 TXN2Q99757 166 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 TMEM14BQ9NUH8 114 aa10.79□□□□□ -0.68
SMARCE1-209ENST00000478349 CXorf65A6NEN9 183 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 EIF4EP06730 217 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 MFAP4P55083 255 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 PHLDA2Q53GA4 152 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 WFDC3Q8IUB2 231 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 GPX8Q8TED1 209 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 AP3S1Q92572 193 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 OVOL2Q9BRP0 275 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 GINS3Q9BRX5 216 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 COMMD3Q9UBI1 195 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 NSG2Q9Y328 171 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 SELENOKQ9Y6D0 94 aa10.78□□□□□ -0.68
SMARCE1-209ENST00000478349 K7EIM0 57 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 SPRY2O43597 315 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 YIF1AO95070 293 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 UCP3P55916 312 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 ERHP84090 104 aaKnown RBP10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 MZT2AQ6P582 158 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 TBC1D26Q86UD7 250 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 ZNF114Q8NC26 417 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 C15orf40Q8WUR7 153 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 MISP3Q96FF7 219 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 ZNF486Q96H40 463 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-209ENST00000478349 GNG7O60262 68 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 FCGR2BP31994 310 aaPredicted RBP10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 TGFBR1P36897 503 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 PAFAH1B2P68402 229 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 PRCDQ00LT1 54 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 TNFRSF9Q07011 255 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 SNX29P2Q8IUI4 249 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 CHRDL1Q9BU40 450 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 PDCD10Q9BUL8 212 aa10.76□□□□□ -0.69
SMARCE1-209ENST00000478349 DYNC2H1Q8NCM8 4307 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 IGHV3-21A0A0B4J1V1 117 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 CORTO00230 105 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 TBPP20226 339 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 SNCAP37840 140 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 NPBWR1P48145 328 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 RORCP51449 518 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 DEFB135Q30KP9 77 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 RNASE10Q5GAN6 216 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 LYSMD2Q8IV50 215 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 ARRDC1Q8N5I2 433 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 TMEM116Q8NCL8 245 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 SEC22AQ96IW7 307 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 UBQLN2Q9UHD9 624 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 KLK5Q9Y337 293 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-209ENST00000478349 TRAV14DV4A0A0A6YYC5 116 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 IGHV7-4-1A0A0J9YVY3 117 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 FAM25AB3EWG3 89 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 FAM25CB3EWG5 89 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 FAM25GB3EWG6 89 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 CTSDP07339 412 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 CTSGP08311 255 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 PGAM2P15259 253 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 ADMP35318 185 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 AKR1C2P52895 323 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 SUB1P53999 127 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 MFAP2P55001 183 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 HSPE1P61604 102 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 ODF3L2Q3SX64 289 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 LYG2Q86SG7 212 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 MRGPRFQ96AM1 343 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 OR10C1Q96KK4 312 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
SMARCE1-209ENST00000478349 A0A0J9YWU9 116 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 B3GALNT1O75752 331 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 MT-CO2P00403 227 aa10.73□□□□□ -0.69
SMARCE1-209ENST00000478349 RND3P61587 244 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms