RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 DCUN1D4Q92564 292 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 TMEM186Q96B77 213 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 RITA1Q96K30 269 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 NABP2Q9BQ15 211 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
BRCA1-208ENST00000468300 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-208ENST00000468300 IGHV2-70DA0A0C4DH43 119 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 OR2C1O95371 312 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 HPRT1P00492 218 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 REG1BP48304 166 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 THBS3P49746 956 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 SEC61GP60059 68 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 KLRD1Q13241 179 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 TEX261Q6UWH6 196 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 KRTAP1-3Q8IUG1 177 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 FAM168AQ92567 244 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 U3KQ87 197 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 RNASEK-C17orf49H0YIS7 233 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 OR2F2O95006 317 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 RPLP1P05386 114 aaKnown RBP6.67□□□□□ -1.34
BRCA1-208ENST00000468300 HOXB4P17483 251 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-208ENST00000468300 EPHA1P21709 976 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 OR2F1Q13607 317 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 RNASEKQ6P5S7 137 aaKnown RBP6.67□□□□□ -1.34
BRCA1-208ENST00000468300 PNKDQ8N490 385 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 HELZ2Q9BYK8 2649 aaKnown RBP6.67□□□□□ -1.34
BRCA1-208ENST00000468300 IGLV2-23P01705 113 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 METTL15P1P0C7V9 234 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 PRTN3P24158 256 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 RELBQ01201 579 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 POU2AF1Q16633 256 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 DHRS7BQ6IAN0 325 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-208ENST00000468300 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 VMO1Q7Z5L0 202 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 S1PR3Q99500 378 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 CLEC7AQ9BXN2 247 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 HSPB7Q9UBY9 170 aa6.67□□□□□ -1.34
BRCA1-208ENST00000468300 M0R143 59 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 NKX2-1P43699 371 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-208ENST00000468300 RAB9AP51151 201 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 HAGHQ16775 308 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 SAMD13Q5VXD3 122 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 TBX15Q96SF7 602 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 ARL6Q9H0F7 186 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 WFDC1Q9HC57 220 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 SS18L2Q9UHA2 77 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 A0A0D9SG52 128 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 IGSF23A1L1A6 192 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 CHST1O43916 411 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 KIR2DS2P43631 304 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 SUMO1P63165 101 aaKnown RBP6.66□□□□□ -1.34
BRCA1-208ENST00000468300 DYNAPQ8N1N2 210 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 OR10X1Q8NGY0 326 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 C1orf159Q96HA4 380 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 QTRT1Q9BXR0 403 aaKnown RBP6.66□□□□□ -1.34
BRCA1-208ENST00000468300 NSG2Q9Y328 171 aa6.66□□□□□ -1.34
BRCA1-208ENST00000468300 A0A1W2PPI3 338 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 K7EP13 123 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 BCL2L11O43521 198 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 SSSCA1O60232 199 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 COX7A1P24310 79 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 P2RY1P47900 373 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 OR4S2Q8NH73 311 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 ADTRPQ96IZ2 230 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 SPIN2AQ99865 258 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 SPIN2BQ9BPZ2 258 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 CR1P17927 2039 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 FAM90A9PA6NNJ1 464 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 E5RGE8 158 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 OR8U8P0C7N1 319 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 RPL12P30050 165 aaKnown RBP6.65□□□□□ -1.34
BRCA1-208ENST00000468300 AKR1C2P52895 323 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 RIPPLY3P57055 190 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 OR4A47Q6IF82 309 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 OR1L6Q8NGR2 347 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 RAB39BQ96DA2 213 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 PCGF1Q9BSM1 259 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 NDUFAF3Q9BU61 184 aa6.65□□□□□ -1.34
BRCA1-208ENST00000468300 BARX1Q9HBU1 254 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-208ENST00000468300 LYRM2Q9NU23 88 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-208ENST00000468300 ARID1AO14497 2285 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 IGHV1-3A0A0C4DH29 117 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 ENSAO43768 121 aaKnown RBP6.65□□□□□ -1.35
BRCA1-208ENST00000468300 SNAPC5O75971 98 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 CRYBA1P05813 215 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 MYOD1P15172 320 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 PAX8Q06710 450 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 EXOSC2Q13868 293 aaKnown RBP6.65□□□□□ -1.35
BRCA1-208ENST00000468300 HAPLN4Q86UW8 402 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 ZDHHC16Q969W1 377 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 CHRDL1Q9BU40 450 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 ARV1Q9H2C2 271 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 RBKSQ9H477 322 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 SMPXQ9UHP9 88 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 INSIG2Q9Y5U4 225 aa6.65□□□□□ -1.35
BRCA1-208ENST00000468300 FAM24AA6NFZ4 105 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 M0QZ24 198 aa6.64□□□□□ -1.35
BRCA1-208ENST00000468300 IFNA7P01567 189 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms