RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MGST2Q99735 147 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 TTTY12Q9BZ98 90 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 IGHV2OR16-5A0A0B4J2B6 119 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 CA2P00918 260 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 CD46P15529 392 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 CX3CL1P78423 397 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 MAJINQ3KP22 176 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 WIPI1Q5MNZ9 446 aaPredicted RBP7.08□□□□□ -1.28
HPS4-206ENST00000439453 C19orf35Q6ZS72 473 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 FAM19A2Q8N3H0 131 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 TMEM45BQ96B21 275 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 GGTLC1Q9BX51 225 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 KCNIP1Q9NZI2 227 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 SPTAN1Q13813 2472 aaKnown RBP7.07□□□□□ -1.28
HPS4-206ENST00000439453 IGHV2-26A0A0B4J1V2 119 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 SRIP30626 198 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 FOXG1P55316 489 aaPredicted RBP7.07□□□□□ -1.28
HPS4-206ENST00000439453 STUMQ69YW2 141 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 TMEM178AQ8NBL3 297 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 OR52L2PQ8NGH6 319 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 MS4A5Q9H3V2 200 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 ZNF835Q9Y2P0 537 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 KLF13Q9Y2Y9 288 aaPredicted RBP7.07□□□□□ -1.28
HPS4-206ENST00000439453 IGHV2-70DA0A0C4DH43 119 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 GNLYP22749 145 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 CLDN18P56856 261 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 COX19Q49B96 90 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 TSKUQ8WUA8 353 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 GALMQ96C23 342 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 DCHS2Q6V1P9 2916 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 BMPR1BO00238 502 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 SLC35B1P78383 322 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 SPATA31B1PQ5VZV4 182 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 LCN12Q6JVE5 192 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 TMEM251Q8N6I4 163 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 FAM173AQ9BQD7 235 aa7.07□□□□□ -1.28
HPS4-206ENST00000439453 CDIPTO14735 213 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 IGHG3P01860 377 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 P04436 131 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 OR10J4P0C629 311 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 MGST1P10620 155 aaKnown RBP7.06□□□□□ -1.28
HPS4-206ENST00000439453 LINC00205P59089 165 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 CLEC7AQ9BXN2 247 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 GSX1Q9H4S2 264 aaPredicted RBP7.06□□□□□ -1.28
HPS4-206ENST00000439453 CDC42EP3Q9UKI2 254 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 C12orf77C9JDV5 145 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 MT-CO2P00403 227 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 AMY1AP04745 511 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 OR9G9P0C7N8 305 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 TNFSF4P23510 183 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 S100A7P31151 101 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 GNG4P50150 75 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 PMCHL1Q16048 86 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 CENPWQ5EE01 88 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 SSMEM1Q8WWF3 244 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 LINC00470Q9BZP3 86 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 HCFC1P51610 2035 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 POLEQ07864 2286 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 CSMD2Q7Z408 3487 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 IGHV1-69-2A0A0G2JMI3 117 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 IGLC7A0M8Q6 106 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 LINC00473A8K010 186 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 J3QKU1 62 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 FOXH1O75593 365 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 MAGEA5P43359 124 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 TCL1AP56279 114 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 ERVK11-1P61568 191 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 WDR86Q86TI4 376 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 PNKDQ8N490 385 aa7.06□□□□□ -1.28
HPS4-206ENST00000439453 RNASE7Q9H1E1 156 aaKnown RBP7.06□□□□□ -1.28
HPS4-206ENST00000439453 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
HPS4-206ENST00000439453 A0A1W2PN81 502 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 NXPH2O95156 264 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 HLA-DQA1P01909 254 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 COL8A2P25067 703 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 RHOBP62745 196 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 FXYD3Q14802 87 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 MRPL54Q6P161 138 aaKnown RBP7.05□□□□□ -1.28
HPS4-206ENST00000439453 DOLPP1Q86YN1 238 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 Q8IYB0 196 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 SCCPDHQ8NBX0 429 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 SPRR3Q9UBC9 169 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 DOCK7Q96N67 2140 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 TMEM30CPA0ZSE6 113 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 HELTA6NFD8 242 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 HBZP02008 142 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 APOA2P02652 100 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 ARR3P36575 388 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 PLP2Q04941 152 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 EFNB3Q15768 340 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 PQLC2Q6ZP29 291 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 MRGPRDQ8TDS7 321 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 NINJ1Q92982 152 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 RTL8AQ9BWD3 113 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 PLEKHA3Q9HB20 300 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 HES4Q9HCC6 221 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
HPS4-206ENST00000439453 ASH1LQ9NR48 2969 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms