RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SBSNQ6UWP8 590 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 LINC00322Q6ZN03 302 aaPredicted RBP-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 CRLF3Q8IUI8 442 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 RNASEH2CQ8TDP1 164 aaKnown RBP-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 RASSF5Q8WWW0 418 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 CMTM5Q96DZ9 223 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 BCL7BQ9BQE9 202 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 BBS2Q9BXC9 721 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 OR8D2Q9GZM6 311 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 TLNRD1Q9H1K6 362 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 XPNPEP1Q9NQW7 623 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 NHP2Q9NX24 153 aaKnown RBP-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 MED29Q9NX70 200 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 IL36BQ9NZH7 164 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 RIC1Q4ADV7 1423 aa-0.14□□□□□ -2.43
SNORD28B-201ENST00000390993 NCOR2Q9Y618 2525 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 LRP1Q07954 4544 aaKnown RBP-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TRAV1-1A0A0B4J248 108 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 LINC00854A0A1B0GVQ3 168 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 CCL25O15444 150 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TCL1BO95988 128 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 PRM2P04554 102 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 KRT7P08729 469 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 COX6A1P12074 109 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 CXCL3P19876 107 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 SYT1P21579 422 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 CDC34P49427 236 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 CNBPP62633 177 aaKnown RBP-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 RHEBQ15382 184 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 KHDC3LQ587J8 217 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TNFAIP8L3Q5GJ75 292 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 C1orf137Q5JT78 98 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 SPANXN3Q5MJ09 141 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 SAPCD1Q5SSQ6 148 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 C6orf52Q5T4I8 152 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 SYPL2Q5VXT5 272 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 IQCF2Q8IXL9 164 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 OR2T4Q8NH00 348 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TEX47Q8TBZ9 253 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 SLC37A2Q8TED4 501 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 DHRS9Q9BPW9 319 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 HDHD2Q9H0R4 259 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 OR51I2Q9H344 312 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 C1orf109Q9NX04 203 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 EURLQ9NYK6 297 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 CHMP5Q9NZZ3 219 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 ANAPC10Q9UM13 185 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TNFSF18Q9UNG2 199 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 PXMP4Q9Y6I8 212 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 E9PCH4 1651 aa-0.15□□□□□ -2.43
SNORD28B-201ENST00000390993 TRAV12-1A0A0B4J245 112 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 A0A1B0GV50 99 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 TLCD2A6NGC4 264 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 OR4C45A6NMZ5 311 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 F8VZ95 297 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 INMT-MINDY4F8WBC2 141 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 M0R378 163 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 CLPSP04118 112 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 CTSDP07339 412 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 PET100P0DJ07 73 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 KDELR2P33947 212 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 SSR2P43308 183 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 CARD18P57730 90 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 QRFPP83859 136 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 SLAMF1Q13291 335 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 ZNHIT3Q15649 155 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 RNASE10Q5GAN6 216 aaKnown RBP-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 RPL22L1Q6P5R6 122 aaKnown RBP-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 ATOH7Q8N100 152 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 OR5L1Q8NGL2 311 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 EFCAB1Q9HAE3 211 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 DKKL1Q9UK85 242 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 TP53TG1Q9Y2A0 90 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 SLC35A3Q9Y2D2 325 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 RIMS2Q9UQ26 1411 aa-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 HRNRQ86YZ3 2850 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 COL1A1P02452 1464 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28B-201ENST00000390993 OTOGQ6ZRI0 2925 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 TRBV20OR9-2A0A075B6H5 130 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 PQLC2LA1A4F0 135 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 LST1O00453 97 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 TOX3O15405 576 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 SPINK1P00995 79 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 ORM1P02763 201 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 IL3P08700 152 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 MGST1P10620 155 aaKnown RBP-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 CRYGAP11844 174 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 SPINT3P49223 89 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 NKX2-5P52952 324 aaPredicted RBP-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 CXCR4P61073 352 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 CCL20P78556 96 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 GRK1Q15835 563 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 LRRC26Q2I0M4 334 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 AADACL3Q5VUY0 350 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 DNM1P34Q6PK57 102 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 Q6ZQT0 140 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 MIR17HGQ75NE6 70 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 BPIFA4PQ86YQ2 179 aa-0.17□□□□□ -2.44
SNORD28B-201ENST00000390993 CLECL1Q8IZS7 167 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms