RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SFNP31947 248 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 S100A3P33764 101 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ARL2P36404 184 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 UGT2B10P36537 528 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TNNT2P45379 298 aaPredicted RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 CSN1S1P47710 185 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PSMB3P49720 205 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 DAPP51397 102 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 MAP3K7CLP57077 242 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 LINC00313P59037 77 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 DEFA3P59666 94 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 RPL30P62888 115 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 HAMPP81172 84 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 RPL18AQ02543 176 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 RPL18Q07020 188 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SPAG1Q07617 926 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 FGL1Q08830 312 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 LRRC74AQ0VAA2 488 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 INSL4Q14641 139 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PIGYQ3MUY2 71 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 KHDC3LQ587J8 217 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SYT6Q5T7P8 510 aaPredicted RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 FAM74A4Q5TZK3 123 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SYPL2Q5VXT5 272 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TTC23Q5W5X9 447 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 CARD17Q5XLA6 110 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 C8orf74Q6P047 294 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SHQ1Q6PI26 577 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 UQCC3Q6UW78 93 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 C1orf122Q6ZSJ8 110 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SPATA24Q86W54 205 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PLCZ1Q86YW0 608 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 NELFCDQ8IXH7 590 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM251Q8N6I4 163 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM75Q8N9X5 138 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 OR56B2PQ8NGI1 322 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 OR52B4Q8NGK2 314 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 OR52K2Q8NGK3 314 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PPP1R1CQ8WVI7 109 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 PIH1D2Q8WWB5 315 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM234Q8WY98 164 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ANKRD7Q92527 254 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 C12orf43Q96C57 262 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ADAT3Q96EY9 351 aaPredicted RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 OPALINQ96PE5 141 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 AMELXQ99217 191 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SDF2Q99470 211 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 APOL4Q9BPW4 351 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ARPC5LQ9BPX5 153 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 CCDC94Q9BW85 323 aaPredicted RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 SUCNR1Q9BXA5 334 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 EBPLQ9BY08 206 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ZYG11BQ9C0D3 744 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 COA1Q9GZY4 146 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 MED28Q9H204 178 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 AUNIPQ9H7T9 357 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 RNF122Q9H9V4 155 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 HRASLSQ9HDD0 168 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 C12orf4Q9NQ89 552 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 IFT46Q9NQC8 304 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 BATF3Q9NR55 127 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 MRPL35Q9NZE8 188 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 TMEM216Q9P0N5 145 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 DNAJB9Q9UBS3 223 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 CFDP1Q9UEE9 299 aaPredicted RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 NOSIPQ9Y314 301 aaKnown RBP-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 S4R3F8 94 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 LAMB1P07942 1786 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 RIC1Q4ADV7 1423 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 ANKRD50Q9ULJ7 1429 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 MIA3Q5JRA6 1907 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 A0A1W2PP64 1363 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 USP47Q96K76 1375 aa-0.84□□□□□ -2.54
TRAJ28-201ENST00000390509 CENPEQ02224 2701 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 TRBV20OR9-2A0A075B6H5 130 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 TRBV10-3A0A0K0K1G6 114 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 KBTBD11-OT1A0A1B0GTJ5 212 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 LOC101927531A0A1B0GV80 90 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 A0A1B0GX12 115 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 GSTTP1A0A1W2PQM5 241 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 PQLC2LA1A4F0 135 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 SMCO2A6NFE2 343 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 FAM183AA6NL82 134 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 FABP5P3A8MUU1 101 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 I3L2K1 104 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 GOLGA8RI6L899 631 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 DFFAO00273 331 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 IFRD1O00458 451 aaPredicted RBP-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 NPFFO15130 113 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 ARPC3O15145 178 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 MAPK13O15264 365 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 TGOLN2O43493 480 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 CYTH3O43739 400 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 TIMM8AO60220 97 aaPredicted RBP-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 BCE1O60756 84 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 TSPAN12O95859 305 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 GCGP01275 180 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 IFNB1P01574 187 aa-0.85□□□□□ -2.55
TRAJ28-201ENST00000390509 GYPBP06028 91 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms