RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SFTA2Q6UW10 78 aa20.1■□□□□ 0.81
RAPGEF1-203ENST00000372195 KBTBD11-OT1A0A1B0GTJ5 212 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 UCP1P25874 307 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 RPP21Q9H633 154 aaKnown RBP20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 SDF2L1Q9HCN8 221 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 DEPPQ9NTK1 212 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 ELOVL5Q9NYP7 299 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 DNAJC13O75165 2243 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 A0A0A6YYD4 124 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 NPIPB13A6NJU9 1138 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 NPIPB4C9JG80 1138 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 TMEM250H0YL14 139 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 C1QTNF9P0C862 333 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 CASP8AP2Q9UKL3 1982 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 SAA2-SAA4A0A096LPE2 208 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 PGPEP1LA6NFU8 196 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 SAA2P0DJI9 122 aaPredicted RBP20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 TIMM23BQ5SRD1 257 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 GLRXP35754 106 aa20.09■□□□□ 0.81
RAPGEF1-203ENST00000372195 GPX4P36969 197 aaPredicted RBP20.08■□□□□ 0.81
RAPGEF1-203ENST00000372195 C9orf106Q8NAJ2 232 aa20.08■□□□□ 0.81
RAPGEF1-203ENST00000372195 SCGB3A1Q96QR1 104 aa20.08■□□□□ 0.81
RAPGEF1-203ENST00000372195 UMODP07911 640 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 PPP1R27Q86WC6 154 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 VWCEQ96DN2 955 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 CHRNA10Q9GZZ6 450 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 TSPOP30536 169 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 LHX2P50458 406 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 GFI1BQ5VTD9 330 aa20.08■□□□□ 0.8
RAPGEF1-203ENST00000372195 SERF1AO75920 110 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 KIR3DL3Q8N743 410 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 WFDC12Q8WWY7 111 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 WFDC1Q9HC57 220 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 ASIPP42127 132 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 RPL23P62829 140 aaKnown RBP20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 SLC25A28Q96A46 364 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 NYNRINQ9P2P1 1898 aaKnown RBP20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 SAA1P0DJI8 122 aaPredicted RBP20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 SAPCD1Q5SSQ6 148 aa20.07■□□□□ 0.8
RAPGEF1-203ENST00000372195 HIGD1CA8MV81 97 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 HOXA5P20719 270 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 ARPC1AQ92747 370 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 APOMO95445 188 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 FMC1Q96HJ9 113 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 A0A1B0GWB2 263 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 OR11H12B2RN74 326 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 OR11H1Q8NG94 326 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 OR11H2Q8NH07 326 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 PF4P02776 101 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 CDKN1AP38936 164 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 DUX3Q96PT4 197 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 VSIRQ9H7M9 311 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 GFI1Q99684 422 aa20.06■□□□□ 0.8
RAPGEF1-203ENST00000372195 ZNF319Q9P2F9 582 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 IGKV1-9A0A0C4DH69 117 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 LYNX1G3V0Z9 82 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 LYNX1P0DP58 116 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 C1QL4Q86Z23 238 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 GFRA3O60609 400 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 CA1P00915 261 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 NEUROG3Q9Y4Z2 214 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 TNFRSF18Q9Y5U5 241 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 FGFBP3Q8TAT2 258 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 LRRC37AA6NMS7 1700 aa20.05■□□□□ 0.8
RAPGEF1-203ENST00000372195 IGKV1D-8A0A087WSZ0 117 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 PYYP10082 97 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 LEPP41159 167 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 LY6G6FQ5SQ64 297 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 OSR1Q8TAX0 266 aaPredicted RBP20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 Q5PR19 223 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 NUP37Q8NFH4 326 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 CCL20P78556 96 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 BRCA1P38398 1863 aaKnown RBP20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 PPIFP30405 207 aaKnown RBP20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 NIT1Q86X76 327 aa20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 FNDC4Q9H6D8 234 aaPredicted RBP20.04■□□□□ 0.8
RAPGEF1-203ENST00000372195 CA7P43166 264 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 ABHD17AQ96GS6 310 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 C21orf62Q9NYP8 219 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 DPM3Q9P2X0 92 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 SCN4AP35499 1836 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 A0A1B0GUT8 65 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 PINLYPA6NC86 204 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 TNFSF10P50591 281 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 IZUMO1RA6ND01 250 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 SPCS1Q9Y6A9 102 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 A6NNC1 897 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 FOXH1O75593 365 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 C10orf126Q8N4M7 172 aa20.03■□□□□ 0.8
RAPGEF1-203ENST00000372195 PTPRZ1P23471 2315 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 WBP1Q96G27 269 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 NUDT11Q96G61 164 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 H0YIZ8 118 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 DEFB104AQ8WTQ1 72 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 ALKBH7Q9BT30 221 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 TOMM7Q9P0U1 55 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 H3BUT2 72 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 LYPD3O95274 346 aa20.02■□□□□ 0.8
RAPGEF1-203ENST00000372195 EFEMP2O95967 443 aa20.02■□□□□ 0.79
RAPGEF1-203ENST00000372195 IQCF6A8MYZ5 107 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms