RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 LYRM1O43325 122 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 DHFRP00374 187 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 AREGP15514 252 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 BTCP35070 178 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 MYCNOSP40205 109 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 SUPT4H1P63272 117 aaKnown RBP12.03□□□□□ -0.48
CLN6-211ENST00000635754 DEFB136Q30KP8 78 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TMEM268Q5VZI3 342 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
CLN6-211ENST00000635754 LHFPL5Q8TAF8 219 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TMEM56Q96MV1 263 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 OR5B12Q96R08 314 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 HINT2Q9BX68 163 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TMEM56-RWDD3S4R434 201 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 IGLC7A0M8Q6 106 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 I3L521 148 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 CCL24O00175 119 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 PLA2G10O15496 165 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 LGALS1P09382 135 aaKnown RBP12.02□□□□□ -0.49
CLN6-211ENST00000635754 P0C879 139 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 VAMP1P23763 118 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 PSMB6P28072 239 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 SRPXP78539 464 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 RUNX1Q01196 453 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 TMEM187Q14656 261 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 IZUMO4Q1ZYL8 232 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 ETV3LQ6ZN32 361 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 FAM219AQ8IW50 185 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 SELENOHQ8IZQ5 122 aaKnown RBP12.02□□□□□ -0.49
CLN6-211ENST00000635754 IL22RA2Q969J5 263 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 LSM10Q969L4 123 aaKnown RBP12.02□□□□□ -0.49
CLN6-211ENST00000635754 RAX2Q96IS3 184 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 NDUFA4L2Q9NRX3 87 aa12.02□□□□□ -0.49
CLN6-211ENST00000635754 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 DBX1A6NMT0 343 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 PRH1P02810 166 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 REG1AP05451 166 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 CRYGCP07315 174 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 DEFA4P12838 97 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 CTRB1P17538 263 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 CD33P20138 364 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 UBE2MP61081 183 aaKnown RBP12.01□□□□□ -0.49
CLN6-211ENST00000635754 RHOGP84095 191 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 CTRB2Q6GPI1 263 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 ZNF429Q86V71 674 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 MRPL41Q8IXM3 137 aaKnown RBP12.01□□□□□ -0.49
CLN6-211ENST00000635754 LGI3Q8N145 548 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 OR10W1Q8NGF6 305 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 USMG5Q96IX5 58 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 DUX3Q96PT4 197 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 P2RX4Q99571 388 aa12.01□□□□□ -0.49
CLN6-211ENST00000635754 FBN3Q75N90 2809 aa12□□□□□ -0.49
CLN6-211ENST00000635754 A0A0G2JRQ6 117 aa12□□□□□ -0.49
CLN6-211ENST00000635754 FAM223BA6NKX1 122 aa12□□□□□ -0.49
CLN6-211ENST00000635754 OR13C7P0DN81 318 aa12□□□□□ -0.49
CLN6-211ENST00000635754 MECP2P51608 486 aaKnown RBP12□□□□□ -0.49
CLN6-211ENST00000635754 FAM223AQ8IWN6 122 aa12□□□□□ -0.49
CLN6-211ENST00000635754 SLC35G3Q8N808 338 aa12□□□□□ -0.49
CLN6-211ENST00000635754 NECAP1Q8NC96 275 aa12□□□□□ -0.49
CLN6-211ENST00000635754 OR11H1Q8NG94 326 aa12□□□□□ -0.49
CLN6-211ENST00000635754 PDCD10Q9BUL8 212 aa12□□□□□ -0.49
CLN6-211ENST00000635754 PRR13Q9NZ81 148 aa12□□□□□ -0.49
CLN6-211ENST00000635754 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 A0A0B4J293 547 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 CYB5BO43169 146 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 UPK1BO75841 260 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
CLN6-211ENST00000635754 RAB25P57735 213 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 HSPE1P61604 102 aaKnown RBP11.99□□□□□ -0.49
CLN6-211ENST00000635754 PRCDQ00LT1 54 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 DEFA5Q01523 94 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 WT1-ASQ06250 92 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 ZNF616Q08AN1 781 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 PPP1R1AQ13522 171 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 C19orf35Q6ZS72 473 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 LINC00482Q8N8I6 264 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 OR1N2Q8NGR9 330 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 DPF1Q92782 380 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 ALX4Q9H161 411 aaPredicted RBP11.99□□□□□ -0.49
CLN6-211ENST00000635754 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
CLN6-211ENST00000635754 A0A0B4J2A0 478 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 ST8SIA3O43173 380 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 SFT2D2O95562 160 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 IFNA17P01571 189 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 OR8U8P0C7N1 319 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 ATP5G2Q06055 141 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 ASAH1Q13510 395 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 FHL3Q13643 280 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 MZT2BQ6NZ67 158 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 C20orf85Q9H1P6 137 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.98□□□□□ -0.49
CLN6-211ENST00000635754 SHPKQ9UHJ6 478 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 TBC1D24Q9ULP9 559 aa11.98□□□□□ -0.49
CLN6-211ENST00000635754 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 OR2J3O76001 311 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 HLA-AP01891 365 aaKnown RBP11.97□□□□□ -0.49
CLN6-211ENST00000635754 C15orf32Q32M92 178 aa11.97□□□□□ -0.49
CLN6-211ENST00000635754 WFDC9Q8NEX5 89 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms