RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 IGKV1-5P01602 117 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 UCP1P25874 307 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 ATP5G2Q06055 141 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 IZUMO4Q1ZYL8 232 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 TRIM16LQ309B1 348 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 ZNF343Q6P1L6 599 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
NCBP3-207ENST00000577169 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 TSC22D3Q99576 134 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
NCBP3-207ENST00000577169 HINT2Q9BX68 163 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
NCBP3-207ENST00000577169 NAA60Q9H7X0 242 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
NCBP3-207ENST00000577169 CRYM-AS1A6NIL9 109 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 B3GALNT1O75752 331 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 NDUFB8O95169 186 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 PRB2P02812 416 aaPredicted RBP12.09□□□□□ -0.47
NCBP3-207ENST00000577169 OR5AC1P0C628 307 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 RANGRFQ9HD47 186 aaPredicted RBP12.09□□□□□ -0.47
NCBP3-207ENST00000577169 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 PEF1Q9UBV8 284 aaKnown RBP12.09□□□□□ -0.47
NCBP3-207ENST00000577169 FBXL7Q9UJT9 491 aa12.09□□□□□ -0.47
NCBP3-207ENST00000577169 CMYA5Q8N3K9 4069 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 C15orf61A6NNL5 157 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 ATG12O94817 140 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 CDS2O95674 445 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 DHFRP00374 187 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 OR13C7P0DN81 318 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 DEFA4P12838 97 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 AKR1C4P17516 323 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 HOXD3P31249 432 aaPredicted RBP12.08□□□□□ -0.48
NCBP3-207ENST00000577169 INPP1P49441 399 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 DHODHQ02127 395 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 KLK9Q2XQG4 91 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 CNPY1Q3B7I2 92 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 THOC7Q6I9Y2 204 aaKnown RBP12.08□□□□□ -0.48
NCBP3-207ENST00000577169 SGPP2Q8IWX5 399 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 SELENOHQ8IZQ5 122 aaKnown RBP12.08□□□□□ -0.48
NCBP3-207ENST00000577169 DEDD2Q8WXF8 326 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 KLK9Q9UKQ9 250 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 KCNIP3Q9Y2W7 256 aa12.08□□□□□ -0.48
NCBP3-207ENST00000577169 A0A0B4J293 547 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 OVOL1O14753 267 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 P0C879 139 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 HIST1H1BP16401 226 aaKnown RBP12.07□□□□□ -0.48
NCBP3-207ENST00000577169 AKR1C2P52895 323 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
NCBP3-207ENST00000577169 C15orf32Q32M92 178 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 TRIQKQ629K1 86 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 OR5B3Q8NH48 314 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 LHFPL5Q8TAF8 219 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 TMEM56Q96MV1 263 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
NCBP3-207ENST00000577169 IGLV11-55A0A075B6I3 123 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 HSPE1P61604 102 aaKnown RBP12.06□□□□□ -0.48
NCBP3-207ENST00000577169 C9orf66Q5T8R8 295 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 SLC25A24Q6NUK1 477 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
NCBP3-207ENST00000577169 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
NCBP3-207ENST00000577169 RRNAD1Q96FB5 475 aaKnown RBP12.06□□□□□ -0.48
NCBP3-207ENST00000577169 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 S4R3C0 116 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
NCBP3-207ENST00000577169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
NCBP3-207ENST00000577169 IGHV3-23P01764 117 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 ZP3P21754 424 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
NCBP3-207ENST00000577169 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
NCBP3-207ENST00000577169 TMEM187Q14656 261 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 Q6ZRM9 215 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
NCBP3-207ENST00000577169 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
NCBP3-207ENST00000577169 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 SLC25A21Q9BQT8 299 aaPredicted RBP12.05□□□□□ -0.48
NCBP3-207ENST00000577169 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 TMEM56-RWDD3S4R434 201 aa12.05□□□□□ -0.48
NCBP3-207ENST00000577169 NAP1L6A6NFF2 107 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 ST8SIA3O43173 380 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 IL7P13232 177 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 CCR6P51684 374 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 MFAP2P55001 183 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 PRCDQ00LT1 54 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 EGFEM1PQ0D2K5 195 aa12.04□□□□□ -0.48
NCBP3-207ENST00000577169 KLF5Q13887 457 aaPredicted RBP12.04□□□□□ -0.48
NCBP3-207ENST00000577169 TMEM268Q5VZI3 342 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms