RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 BAK1Q16611 211 aa13.2□□□□□ -0.3
PSEN1-217ENST00000556533 IZUMO4Q1ZYL8 232 aa13.2□□□□□ -0.3
PSEN1-217ENST00000556533 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
PSEN1-217ENST00000556533 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
PSEN1-217ENST00000556533 TSC22D3Q99576 134 aa13.2□□□□□ -0.3
PSEN1-217ENST00000556533 MCRIP2Q9BUT9 160 aaKnown RBP13.2□□□□□ -0.3
PSEN1-217ENST00000556533 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
PSEN1-217ENST00000556533 A6NHS1 94 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 ATG12O94817 140 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 DHFRP00374 187 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 IGKV1-5P01602 117 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-217ENST00000556533 MECP2P51608 486 aaKnown RBP13.19□□□□□ -0.3
PSEN1-217ENST00000556533 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 SGPP2Q8IWX5 399 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 NECAP1Q8NC96 275 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 DCUN1D4Q92564 292 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 FBXL7Q9UJT9 491 aa13.19□□□□□ -0.3
PSEN1-217ENST00000556533 TRBV9A0A0B4J1U6 114 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 IGLC7A0M8Q6 106 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 CRYM-AS1A6NIL9 109 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 DBX1A6NMT0 343 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 SEC14L6B5MCN3 397 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 B3GALNT1O75752 331 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 NDUFB8O95169 186 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 CRYGCP07315 174 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 FGF2P09038 288 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 CTRB1P17538 263 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 UCP1P25874 307 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
PSEN1-217ENST00000556533 C15orf32Q32M92 178 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 CNPY1Q3B7I2 92 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 CADM3Q8N126 398 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-217ENST00000556533 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
PSEN1-217ENST00000556533 TMEM222Q9H0R3 208 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 RANGRFQ9HD47 186 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-217ENST00000556533 NDUFA4L2Q9NRX3 87 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 PEF1Q9UBV8 284 aaKnown RBP13.18□□□□□ -0.3
PSEN1-217ENST00000556533 S4R3C0 116 aa13.18□□□□□ -0.3
PSEN1-217ENST00000556533 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 OVOL1O14753 267 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 IGHV3-23P01764 117 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 DHODHQ02127 395 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 ZNF343Q6P1L6 599 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 GLYATL2Q8WU03 294 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 FANCD2OSQ96PS1 177 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 SDHCQ99643 169 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-217ENST00000556533 SRSF8Q9BRL6 282 aaKnown RBP13.17□□□□□ -0.3
PSEN1-217ENST00000556533 GPR61Q9BZJ8 451 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 TMEM14BQ9NUH8 114 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 PRR13Q9NZ81 148 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 KCNIP3Q9Y2W7 256 aa13.17□□□□□ -0.3
PSEN1-217ENST00000556533 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
PSEN1-217ENST00000556533 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
PSEN1-217ENST00000556533 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
PSEN1-217ENST00000556533 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-217ENST00000556533 TMEM268Q5VZI3 342 aa13.16□□□□□ -0.3
PSEN1-217ENST00000556533 OR5B3Q8NH48 314 aa13.16□□□□□ -0.3
PSEN1-217ENST00000556533 LSM10Q969L4 123 aaKnown RBP13.16□□□□□ -0.3
PSEN1-217ENST00000556533 TMEM230Q96A57 120 aa13.16□□□□□ -0.3
PSEN1-217ENST00000556533 TMEM56Q96MV1 263 aa13.16□□□□□ -0.3
PSEN1-217ENST00000556533 A0A0B4J293 547 aa13.15□□□□□ -0.3
PSEN1-217ENST00000556533 CDS2O95674 445 aa13.15□□□□□ -0.3
PSEN1-217ENST00000556533 CCR6P51684 374 aa13.15□□□□□ -0.3
PSEN1-217ENST00000556533 HSPE1P61604 102 aaKnown RBP13.15□□□□□ -0.3
PSEN1-217ENST00000556533 SPINK9Q5DT21 86 aa13.15□□□□□ -0.3
PSEN1-217ENST00000556533 THOC7Q6I9Y2 204 aaKnown RBP13.15□□□□□ -0.3
PSEN1-217ENST00000556533 SLC25A24Q6NUK1 477 aa13.15□□□□□ -0.3
PSEN1-217ENST00000556533 HSD17B13Q7Z5P4 300 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-217ENST00000556533 SELENOHQ8IZQ5 122 aaKnown RBP13.15□□□□□ -0.3
PSEN1-217ENST00000556533 LHFPL5Q8TAF8 219 aa13.15□□□□□ -0.3
PSEN1-217ENST00000556533 CYB5BO43169 146 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 IFNA17P01571 189 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 IL7P13232 177 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 ZP3P21754 424 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 KRTAP10-11P60412 298 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 C9orf66Q5T8R8 295 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 DEDD2Q8WXF8 326 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
PSEN1-217ENST00000556533 SLC25A21Q9BQT8 299 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-217ENST00000556533 TNCP24821 2201 aa13.14□□□□□ -0.31
PSEN1-217ENST00000556533 IGLV11-55A0A075B6I3 123 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
PSEN1-217ENST00000556533 A0A0G2JRQ6 117 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 CENPXA8MT69 81 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 ST8SIA3O43173 380 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 P0C879 139 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 ANXA3P12429 323 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 TMEM187Q14656 261 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 RPEL1Q2QD12 228 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 PDCD10Q9BUL8 212 aa13.13□□□□□ -0.31
PSEN1-217ENST00000556533 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms