RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 HINT2Q9BX68 163 aa17.47■□□□□ 0.39
BRF1-216ENST00000550208 QTRT1Q9BXR0 403 aaKnown RBP17.47■□□□□ 0.39
BRF1-216ENST00000550208 ALX4Q9H161 411 aaPredicted RBP17.47■□□□□ 0.39
BRF1-216ENST00000550208 NDUFA4L2Q9NRX3 87 aa17.47■□□□□ 0.39
BRF1-216ENST00000550208 TMEM14BQ9NUH8 114 aa17.47■□□□□ 0.39
BRF1-216ENST00000550208 FKBP11Q9NYL4 201 aa17.47■□□□□ 0.39
BRF1-216ENST00000550208 A0A0G2JRQ6 117 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 C15orf61A6NNL5 157 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 NPIPB5A8MRT5 1133 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 CRYGCP07315 174 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 RBMS2Q15434 407 aaKnown RBP17.46■□□□□ 0.39
BRF1-216ENST00000550208 TMEM56Q96MV1 263 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 P2RX4Q99571 388 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 FLVCR2Q9UPI3 526 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 ZNF257Q9Y2Q1 563 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 TMEM56-RWDD3S4R434 201 aa17.46■□□□□ 0.39
BRF1-216ENST00000550208 A0A0B4J293 547 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 IGLC7A0M8Q6 106 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 NDUFB6O95139 128 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 CTRB1P17538 263 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 RUNX1Q01196 453 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 TMEM128Q5BJH2 165 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 TMEM268Q5VZI3 342 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 CTRB2Q6GPI1 263 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 MRPL41Q8IXM3 137 aaKnown RBP17.45■□□□□ 0.38
BRF1-216ENST00000550208 WFDC9Q8NEX5 89 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 OR1N2Q8NGR9 330 aa17.45■□□□□ 0.38
BRF1-216ENST00000550208 RBPMSQ93062 196 aaKnown RBP17.45■□□□□ 0.38
BRF1-216ENST00000550208 RRNAD1Q96FB5 475 aaKnown RBP17.45■□□□□ 0.38
BRF1-216ENST00000550208 WDR12Q9GZL7 423 aaKnown RBP17.45■□□□□ 0.38
BRF1-216ENST00000550208 MGAM2Q2M2H8 2515 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 C13orf42A0A1B0GVH6 325 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 LYRM1O43325 122 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 Q6ZRM9 215 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 CENPSQ8N2Z9 138 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 LINC00482Q8N8I6 264 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 OR11H1Q8NG94 326 aa17.44■□□□□ 0.38
BRF1-216ENST00000550208 RNASE11Q8TAA1 199 aaKnown RBP17.44■□□□□ 0.38
BRF1-216ENST00000550208 SRSF8Q9BRL6 282 aaKnown RBP17.44■□□□□ 0.38
BRF1-216ENST00000550208 TRBV9A0A0B4J1U6 114 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 A0A0G2JLM5 398 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 LGALS1P09382 135 aaKnown RBP17.43■□□□□ 0.38
BRF1-216ENST00000550208 OR13C7P0DN81 318 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 HSPE1P61604 102 aaKnown RBP17.43■□□□□ 0.38
BRF1-216ENST00000550208 RHOGP84095 191 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 WT1-ASQ06250 92 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 OR5B3Q8NH48 314 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 GPR146Q96CH1 333 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 FANCD2OSQ96PS1 177 aa17.43■□□□□ 0.38
BRF1-216ENST00000550208 OR2J3O76001 311 aa17.42■□□□□ 0.38
BRF1-216ENST00000550208 ANXA3P12429 323 aa17.42■□□□□ 0.38
BRF1-216ENST00000550208 CD33P20138 364 aa17.42■□□□□ 0.38
BRF1-216ENST00000550208 THOC7Q6I9Y2 204 aaKnown RBP17.42■□□□□ 0.38
BRF1-216ENST00000550208 IL22RA2Q969J5 263 aa17.42■□□□□ 0.38
BRF1-216ENST00000550208 USMG5Q96IX5 58 aa17.42■□□□□ 0.38
BRF1-216ENST00000550208 SFT2D2O95562 160 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 VAMP1P23763 118 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 ATP5G2Q06055 141 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 PPP1R1AQ13522 171 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 LYZL2Q7Z4W2 148 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 FAM219AQ8IW50 185 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 LGI3Q8N145 548 aa17.41■□□□□ 0.38
BRF1-216ENST00000550208 LSM10Q969L4 123 aaKnown RBP17.41■□□□□ 0.38
BRF1-216ENST00000550208 ST8SIA3O43173 380 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 NDUFB8O95169 186 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 DEFA4P12838 97 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 MECP2P51608 486 aaKnown RBP17.4■□□□□ 0.38
BRF1-216ENST00000550208 RAB25P57735 213 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 IFITM3Q01628 133 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 KLK9Q2XQG4 91 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 ANKRD55Q3KP44 614 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 HSD17B13Q7Z5P4 300 aaPredicted RBP17.4■□□□□ 0.38
BRF1-216ENST00000550208 ZNF429Q86V71 674 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 SLC35G3Q8N808 338 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 NECAP1Q8NC96 275 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 DPF1Q92782 380 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 FBXL7Q9UJT9 491 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 KLK9Q9UKQ9 250 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 TBC1D24Q9ULP9 559 aa17.4■□□□□ 0.38
BRF1-216ENST00000550208 IGHV4OR15-8A0A075B7B6 117 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 A0A087WW49 117 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 ANKRD34BA5PLL1 514 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 FAM223BA6NKX1 122 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 UPK1BO75841 260 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 DHFRP00374 187 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 HSPB1P04792 205 aaKnown RBP17.39■□□□□ 0.37
BRF1-216ENST00000550208 PRCDQ00LT1 54 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 ZNF616Q08AN1 781 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 FHL3Q13643 280 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 SPINK9Q5DT21 86 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 ZNF343Q6P1L6 599 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 FAM223AQ8IWN6 122 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 DMRT1Q9Y5R6 373 aa17.39■□□□□ 0.37
BRF1-216ENST00000550208 IGLV11-55A0A075B6I3 123 aa17.38■□□□□ 0.37
BRF1-216ENST00000550208 IGLL1P15814 213 aa17.38■□□□□ 0.37
BRF1-216ENST00000550208 HIST1H1BP16401 226 aaKnown RBP17.38■□□□□ 0.37
BRF1-216ENST00000550208 ANXA7P20073 488 aaKnown RBP17.38■□□□□ 0.37
BRF1-216ENST00000550208 UBE2MP61081 183 aaKnown RBP17.38■□□□□ 0.37
BRF1-216ENST00000550208 SRPXP78539 464 aa17.38■□□□□ 0.37
BRF1-216ENST00000550208 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms