RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 PSMB6P28072 239 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 BTCP35070 178 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 AKR1C2P52895 323 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 DEFA5Q01523 94 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM187Q14656 261 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 RBMS2Q15434 407 aaKnown RBP10.49□□□□□ -0.73
COL1A1-208ENST00000494334 CTRB2Q6GPI1 263 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 C19orf35Q6ZS72 473 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 TMED4Q7Z7H5 227 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 SELENOHQ8IZQ5 122 aaKnown RBP10.49□□□□□ -0.73
COL1A1-208ENST00000494334 LINC00482Q8N8I6 264 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 OR10W1Q8NGF6 305 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 OR5B3Q8NH48 314 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 OR4A16Q8NH70 328 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM56Q96MV1 263 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 SRSF8Q9BRL6 282 aaKnown RBP10.49□□□□□ -0.73
COL1A1-208ENST00000494334 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 PRR13Q9NZ81 148 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 ZNF257Q9Y2Q1 563 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM56-RWDD3S4R434 201 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 A0A0B4J293 547 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 NDUFB6O95139 128 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 REG1AP05451 166 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
COL1A1-208ENST00000494334 FHL3Q13643 280 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM128Q5BJH2 165 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 THOC7Q6I9Y2 204 aaKnown RBP10.48□□□□□ -0.73
COL1A1-208ENST00000494334 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 RBPMSQ93062 196 aaKnown RBP10.48□□□□□ -0.73
COL1A1-208ENST00000494334 RRNAD1Q96FB5 475 aaKnown RBP10.48□□□□□ -0.73
COL1A1-208ENST00000494334 USMG5Q96IX5 58 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 HINT2Q9BX68 163 aa10.48□□□□□ -0.73
COL1A1-208ENST00000494334 MGAM2Q2M2H8 2515 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 C13orf42A0A1B0GVH6 325 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 LYRM1O43325 122 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 ANXA3P12429 323 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 CD33P20138 364 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 HSPE1P61604 102 aaKnown RBP10.47□□□□□ -0.73
COL1A1-208ENST00000494334 RHOGP84095 191 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 WT1-ASQ06250 92 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 ZNF846Q147U1 533 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 KLK9Q2XQG4 91 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 Q6ZRM9 215 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 HSD17B13Q7Z5P4 300 aaPredicted RBP10.47□□□□□ -0.73
COL1A1-208ENST00000494334 ZNF429Q86V71 674 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 CENPSQ8N2Z9 138 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 IL22RA2Q969J5 263 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 LSM10Q969L4 123 aaKnown RBP10.47□□□□□ -0.73
COL1A1-208ENST00000494334 FANCD2OSQ96PS1 177 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 WDR12Q9GZL7 423 aaKnown RBP10.47□□□□□ -0.73
COL1A1-208ENST00000494334 KLK9Q9UKQ9 250 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 FLVCR2Q9UPI3 526 aa10.47□□□□□ -0.73
COL1A1-208ENST00000494334 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 OR2J3O76001 311 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 DHFRP00374 187 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 OR13C7P0DN81 318 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 ZNF616Q08AN1 781 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 FAM219AQ8IW50 185 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 RNASE11Q8TAA1 199 aaKnown RBP10.46□□□□□ -0.73
COL1A1-208ENST00000494334 GPR146Q96CH1 333 aa10.46□□□□□ -0.73
COL1A1-208ENST00000494334 IGLV11-55A0A075B6I3 123 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 A0A087WW49 117 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 LINC01619G3V211 115 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 ST8SIA3O43173 380 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 NDUFB8O95169 186 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 SFT2D2O95562 160 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 HSPB1P04792 205 aaKnown RBP10.45□□□□□ -0.74
COL1A1-208ENST00000494334 DEFA4P12838 97 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 IGLL1P15814 213 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 RAB25P57735 213 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 PRCDQ00LT1 54 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 ATP5G2Q06055 141 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 ZNF343Q6P1L6 599 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 LYZL2Q7Z4W2 148 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 LGI3Q8N145 548 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 NECAP1Q8NC96 275 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 DPF1Q92782 380 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 DMRT1Q9Y5R6 373 aa10.45□□□□□ -0.74
COL1A1-208ENST00000494334 VWFP04275 2813 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 A0A0B4J2A0 478 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 G3V4G9 280 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 OR8U8P0C7N1 319 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 HIST1H1BP16401 226 aaKnown RBP10.44□□□□□ -0.74
COL1A1-208ENST00000494334 VAMP1P23763 118 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 SRPXP78539 464 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 C15orf32Q32M92 178 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 ANKRD55Q3KP44 614 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 SPINK9Q5DT21 86 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 SAMD5Q5TGI4 173 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 RANGRFQ9HD47 186 aaPredicted RBP10.44□□□□□ -0.74
COL1A1-208ENST00000494334 SHPKQ9UHJ6 478 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms