RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ETV3LQ6ZN32 361 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 MRPL41Q8IXM3 137 aaKnown RBP10.84□□□□□ -0.67
CCM2-217ENST00000492883 SELENOHQ8IZQ5 122 aaKnown RBP10.84□□□□□ -0.67
CCM2-217ENST00000492883 OR10W1Q8NGF6 305 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 OR5B3Q8NH48 314 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 DPF1Q92782 380 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 RBPMSQ93062 196 aaKnown RBP10.84□□□□□ -0.67
CCM2-217ENST00000492883 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 TMEM56Q96MV1 263 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 WDR12Q9GZL7 423 aaKnown RBP10.84□□□□□ -0.67
CCM2-217ENST00000492883 NDUFA4L2Q9NRX3 87 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 TMEM14BQ9NUH8 114 aa10.84□□□□□ -0.67
CCM2-217ENST00000492883 DBX1A6NMT0 343 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 OR2J3O76001 311 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 NDUFB6O95139 128 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 CRYGCP07315 174 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 LGALS1P09382 135 aaKnown RBP10.83□□□□□ -0.68
CCM2-217ENST00000492883 OR13C7P0DN81 318 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 VAMP1P23763 118 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 MECP2P51608 486 aaKnown RBP10.83□□□□□ -0.68
CCM2-217ENST00000492883 RHOGP84095 191 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 RUNX1Q01196 453 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 ATP5G2Q06055 141 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 TMEM187Q14656 261 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 HSD17B13Q7Z5P4 300 aaPredicted RBP10.83□□□□□ -0.68
CCM2-217ENST00000492883 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 WFDC9Q8NEX5 89 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 LSM10Q969L4 123 aaKnown RBP10.83□□□□□ -0.68
CCM2-217ENST00000492883 P2RX4Q99571 388 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 ALX4Q9H161 411 aaPredicted RBP10.83□□□□□ -0.68
CCM2-217ENST00000492883 PRR13Q9NZ81 148 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 TMEM56-RWDD3S4R434 201 aa10.83□□□□□ -0.68
CCM2-217ENST00000492883 A0A0B4J293 547 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 IGLC7A0M8Q6 106 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 PLA2G10O15496 165 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 LYRM1O43325 122 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 HSPB1P04792 205 aaKnown RBP10.82□□□□□ -0.68
CCM2-217ENST00000492883 CTRB1P17538 263 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 HSPE1P61604 102 aaKnown RBP10.82□□□□□ -0.68
CCM2-217ENST00000492883 SUPT4H1P63272 117 aaKnown RBP10.82□□□□□ -0.68
CCM2-217ENST00000492883 DEFA5Q01523 94 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 ZNF616Q08AN1 781 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 CTRB2Q6GPI1 263 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 C19orf35Q6ZS72 473 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 FAM219AQ8IW50 185 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 LGI3Q8N145 548 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 NECAP1Q8NC96 275 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 PDCD10Q9BUL8 212 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 FBXL7Q9UJT9 491 aa10.82□□□□□ -0.68
CCM2-217ENST00000492883 TRBV9A0A0B4J1U6 114 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 PIGBOS1A0A0B4J2F0 54 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 ANKRD34BA5PLL1 514 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 CYB5BO43169 146 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 IFNA17P01571 189 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 OR8U8P0C7N1 319 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 P0C879 139 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 HIST1H1BP16401 226 aaKnown RBP10.81□□□□□ -0.68
CCM2-217ENST00000492883 SRPXP78539 464 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 ZNF429Q86V71 674 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 RANGRFQ9HD47 186 aaPredicted RBP10.81□□□□□ -0.68
CCM2-217ENST00000492883 FLVCR2Q9UPI3 526 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 ANK2Q01484 3957 aa10.81□□□□□ -0.68
CCM2-217ENST00000492883 A0A0G2JRQ6 117 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 LINC01619G3V211 115 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 ST8SIA3O43173 380 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 IGLL1P15814 213 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 BTCP35070 178 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 ERHP84090 104 aaKnown RBP10.8□□□□□ -0.68
CCM2-217ENST00000492883 WT1-ASQ06250 92 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 PPP1R1AQ13522 171 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 SLC25A24Q6NUK1 477 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 ZNF343Q6P1L6 599 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 Q6ZRM9 215 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 GPR146Q96CH1 333 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 FANCD2OSQ96PS1 177 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.8□□□□□ -0.68
CCM2-217ENST00000492883 THYN1Q9P016 225 aa10.8□□□□□ -0.68
CCM2-217ENST00000492883 PEF1Q9UBV8 284 aaKnown RBP10.8□□□□□ -0.68
CCM2-217ENST00000492883 IGHV4OR15-8A0A075B7B6 117 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 A0A087WW49 117 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 NDUFB8O95169 186 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 SFT2D2O95562 160 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
CCM2-217ENST00000492883 PRCDQ00LT1 54 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 FHL3Q13643 280 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 EXOSC2Q13868 293 aaKnown RBP10.79□□□□□ -0.68
CCM2-217ENST00000492883 OXLD1Q5BKU9 147 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 SPINK9Q5DT21 86 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 MZT2BQ6NZ67 158 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms