RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 ZNF80P51504 273 aaPredicted RBP0.78□□□□□ -2.28
USP34-216ENST00000487547 RPL18Q07020 188 aaKnown RBP0.78□□□□□ -2.28
USP34-216ENST00000487547 LINC00471Q8N535 108 aa0.78□□□□□ -2.28
USP34-216ENST00000487547 STRCQ7RTU9 1775 aa0.78□□□□□ -2.29
USP34-216ENST00000487547 GGT3PA6NGU5 568 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 YEATS4O95619 227 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 KRT7P08729 469 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 KCNE1P15382 129 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 UBE2IP63279 158 aaKnown RBP0.77□□□□□ -2.29
USP34-216ENST00000487547 ZNF846Q147U1 533 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 CST9Q5W186 159 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 TMEM161BQ8NDZ6 487 aa0.77□□□□□ -2.29
USP34-216ENST00000487547 PAQR5Q9NXK6 330 aaPredicted RBP0.77□□□□□ -2.29
USP34-216ENST00000487547 LOC110117498A0A087WWA1 95 aa0.76□□□□□ -2.29
USP34-216ENST00000487547 CCL1P22362 96 aa0.76□□□□□ -2.29
USP34-216ENST00000487547 EIF2B2P49770 351 aaKnown RBP0.76□□□□□ -2.29
USP34-216ENST00000487547 STX5Q13190 355 aa0.76□□□□□ -2.29
USP34-216ENST00000487547 PPP1R1AQ13522 171 aa0.76□□□□□ -2.29
USP34-216ENST00000487547 GLT8D1Q68CQ7 371 aa0.76□□□□□ -2.29
USP34-216ENST00000487547 C1orf158Q8N1D5 194 aa0.76□□□□□ -2.29
USP34-216ENST00000487547 C7orf50Q9BRJ6 194 aaKnown RBP0.76□□□□□ -2.29
USP34-216ENST00000487547 F5H768 121 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 OR5F1O95221 314 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 SUPT4H1P63272 117 aaKnown RBP0.75□□□□□ -2.29
USP34-216ENST00000487547 IBA57Q5T440 356 aaKnown RBP0.75□□□□□ -2.29
USP34-216ENST00000487547 SYPL2Q5VXT5 272 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 PLEKHG7Q6ZR37 379 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 OR5B17Q8NGF7 314 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 FAM96AQ9H5X1 160 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 IL36BQ9NZH7 164 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 C15orf41Q9Y2V0 281 aa0.75□□□□□ -2.29
USP34-216ENST00000487547 ALPK2Q86TB3 2170 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 TTC21AQ8NDW8 1320 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 C1orf232A0A0U1RR37 186 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 FABP12A6NFH5 140 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 FABP5P3A8MUU1 101 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 RPS4Y1P22090 263 aaKnown RBP0.74□□□□□ -2.29
USP34-216ENST00000487547 BRS3P32247 399 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 WFDC11Q8NEX6 87 aa0.74□□□□□ -2.29
USP34-216ENST00000487547 FAM25EA8MYX2 175 aa0.73□□□□□ -2.29
USP34-216ENST00000487547 MYL12AP19105 171 aa0.73□□□□□ -2.29
USP34-216ENST00000487547 ZNF550Q7Z398 422 aa0.73□□□□□ -2.29
USP34-216ENST00000487547 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
USP34-216ENST00000487547 OR4D11Q8NGI4 311 aa0.73□□□□□ -2.29
USP34-216ENST00000487547 DNAJB3Q8WWF6 145 aa0.73□□□□□ -2.29
USP34-216ENST00000487547 GOLGA6L19H0YKK7 550 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 CALUO43852 315 aaPredicted RBP0.72□□□□□ -2.29
USP34-216ENST00000487547 CLPSP04118 112 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 MED21Q13503 144 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 ZNF826PQ6ZT77 177 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 C10orf67Q8IYJ2 551 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 TMEM106AQ96A25 262 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 CMTM5Q96DZ9 223 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 DIRAS2Q96HU8 199 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 MAP1LC3AQ9H492 121 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 PLEKHJ1Q9NW61 149 aa0.72□□□□□ -2.29
USP34-216ENST00000487547 C19orf84I3L1E1 186 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 PFDN6O15212 129 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 COCHO43405 550 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 REG1AP05451 166 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 UCHL3P15374 230 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 DEFB128Q7Z7B8 93 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 COMMD7Q86VX2 200 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 OBSCN-AS1Q96MR7 158 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 HDHD2Q9H0R4 259 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 EFCAB1Q9HAE3 211 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 CKLFQ9UBR5 152 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 KLK9Q9UKQ9 250 aa0.71□□□□□ -2.3
USP34-216ENST00000487547 ABCC11Q96J66 1382 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 APOEP02649 317 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 PRM2P04554 102 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 TYMSP04818 313 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 FAM228BP0C875 321 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 C8orf88P0DMB2 117 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 RSU1Q15404 277 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 LCN15Q6UWW0 184 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 MCFD2Q8NI22 146 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 RASSF5Q8WWW0 418 aa0.7□□□□□ -2.3
USP34-216ENST00000487547 GOLGA8KD6RF30 607 aa0.69□□□□□ -2.3
USP34-216ENST00000487547 HYPMO75409 117 aa0.69□□□□□ -2.3
USP34-216ENST00000487547 CCL20P78556 96 aa0.69□□□□□ -2.3
USP34-216ENST00000487547 IFITM2Q01629 132 aa0.69□□□□□ -2.3
USP34-216ENST00000487547 DEFB125Q8N687 156 aa0.69□□□□□ -2.3
USP34-216ENST00000487547 DCCP43146 1447 aa0.69□□□□□ -2.3
USP34-216ENST00000487547 A0A1B0GV50 99 aa0.68□□□□□ -2.3
USP34-216ENST00000487547 HTR1AP08908 422 aa0.68□□□□□ -2.3
USP34-216ENST00000487547 RPL12P30050 165 aaKnown RBP0.68□□□□□ -2.3
USP34-216ENST00000487547 SPANXN5Q5MJ07 72 aa0.68□□□□□ -2.3
USP34-216ENST00000487547 PHF13Q86YI8 300 aaPredicted RBP0.68□□□□□ -2.3
USP34-216ENST00000487547 CNBD2Q96M20 576 aa0.68□□□□□ -2.3
USP34-216ENST00000487547 IMP3Q9NV31 184 aaKnown RBP0.68□□□□□ -2.3
USP34-216ENST00000487547 NCOA6Q14686 2063 aaPredicted RBP0.68□□□□□ -2.3
USP34-216ENST00000487547 TNRC6BQ9UPQ9 1833 aaKnown RBP0.67□□□□□ -2.3
USP34-216ENST00000487547 FADS1O60427 444 aa0.67□□□□□ -2.3
USP34-216ENST00000487547 MAP2K4P45985 399 aa0.67□□□□□ -2.3
USP34-216ENST00000487547 MARCKSL1P49006 195 aa0.67□□□□□ -2.3
USP34-216ENST00000487547 MAP3K7CLP57077 242 aa0.67□□□□□ -2.3
USP34-216ENST00000487547 UBE2G2P60604 165 aa0.67□□□□□ -2.3
USP34-216ENST00000487547 COQ5Q5HYK3 327 aa0.67□□□□□ -2.3
USP34-216ENST00000487547 FAM9CQ8IZT9 166 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms